FFCP PHASE1:Hg19::chr19:46002944..46002966,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=147699 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26845 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=76bp_to_ENST00000396735,uc002pcf.2_5end | |||
|cluster_id=chr19:46002944..46002966,+ | |||
|description=CAGE_peak_3_at_PPM1N_5end | |||
|id=chr19:46002944..46002966,+ | |||
|ontology_enrichment_celltype=CL:0000039!4.91e-14!7;CL:0000586!4.91e-14!7;CL:0002322!5.26e-10!5;CL:0000875!4.87e-07!3;CL:0002396!4.87e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.68e-40;7!CL:0000586;3.68e-40;7!CL:0002322;1.36e-27;5!CL:0000875;1.58e-18;3!CL:0002396;1.58e-18;3!CL:0001014;3.81e-12;2!CL:0001016;3.81e-12;2!CL:0000540;3.88e-09;6!CL:0000404;3.88e-09;6!CL:0002321;4.49e-09;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.48e-40,7;CL:0000586,3.48e-40,7;CL:0002322,1.18e-27,5;CL:0000875,1.73e-18,3;CL:0002396,1.73e-18,3;CL:0001014,3.92e-12,2;CL:0001016,3.92e-12,2;CL:0002393,1.97e-10,9;CL:0002397,1.97e-10,9;CL:0000540,4.16e-09,6;CL:0000031,4.16e-09,6;CL:0000404,4.16e-09,6;CL:0000047,6.18e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.86e-14;10!UBERON:0005564;2.86e-14;10!CL:0000031;3.88e-09;6 | |||
|ontology_enrichment_disease=DOID:3095!2.03e-08!22;DOID:2994!2.03e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.37e-19;22!DOID:2994;1.37e-19;22!DOID:1799;4.38e-07;1!DOID:10165;4.38e-07;1!DOID:1798;4.38e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.21e-19,22;DOID:2994,1.21e-19,22;DOID:1799,4.01e-07,1;DOID:10165,4.01e-07,1;DOID:1798,4.01e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.35e-08!7;UBERON:0000473!6.27e-08!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.19e-12;8!UBERON:0002106;9.07e-09;3!UBERON:0003135;1.06e-08;11!UBERON:0002323;2.50e-07;45!UBERON:0000922;7.51e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.77e-12,8;UBERON:0002106,9.43e-09,3;UBERON:0004854,9.43e-09,3;UBERON:0009034,9.43e-09,3;UBERON:0002095,9.43e-09,3;UBERON:0004782,9.43e-09,3;UBERON:0003281,9.43e-09,3;UBERON:0009664,9.43e-09,3;UBERON:0002296,9.43e-09,3;UBERON:0005602,9.43e-09,3;UBERON:0001179,9.43e-09,3;UBERON:0006293,9.43e-09,3;UBERON:0003135,1.01e-08,11;UBERON:0002323,1.37e-08,46;UBERON:0004458,5.68e-08,49;UBERON:0003886,4.26e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0,1.18009283054671,0.383829398097213,0.154816123316076,0,0,0,0.154934401160603,0.142169232487422,0,0,0,0,0,0,0,0.290796477559129,0.377875943688809,0,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0.449446968890169,0,0,0,0,0,0,0.290209238628584,0,0.622822248995575,0,0,0,0,0,0,0,0.637812899895131,1.04829322754188,0,0,0,5.13022938734247,9.74691718275542,7.12390199682072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0.445641827540694,0,0,0,0,0.130059347559878,0,0,0,0.296573126324121,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65921118388786,4.5060121229305,2.78865462886844,2.798848485415,3.02785021050754,3.28479623168247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.594524649154913,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,3.51579964002488,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0.344743373241465,0,0,0,0,0,0,0,0,0.10893846351899,0,0.153900517007594,0,9.45312007991047,6.91133861955245,3.15077378573823,0.638002319463839,0,0,0,0,0,2.03036094555463,2.35275041181287,2.01385904371011,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,1.56531695145672,0,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0.0730893170861856,0,0.0969890164884194,0,0.225980740780532,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0.196854963029498,0.254019996197353,0,0,3.05430982083536,3.30094647833361,6.23160507043778,4.94942561413301,2.32140586367385,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0.146552233678082,0,0,0.13223260174269,0,0,0.213574825135389,0.157204305099666,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0.97894681802587,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97622719514703,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0,0,0.266107110487916,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,2.33939463462106,0,0,0,2.19881033490858,3.77407108916684,0,0.218559560503957,0,0,0,0,0,0,0,5.16911548889195,5.35000470180691,0.199882311849858,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,2.90182777120682,1.31118686356435,0.506794004045748,5.40540797632503,5.87878291584233,8.45433075720573,4.76344324655513,0.0757786982182394,0.267964130156178,0,0,0.213233981900981,0,0.322944549180031,0.869046000142011,0.112131862580613,0,0,0,0,0.134704106029175,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@PPM1N | |||
}} |
Latest revision as of 18:21, 18 September 2015
Short description: | p3@PPM1N |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PPM1N_5end |
Coexpression cluster: | NA |
Association with transcript: | 76bp_to_ENST00000396735, uc002pcf.2_5end |
EntrezGene: | PPM1N |
HGNC: | 26845 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.48e-40 | 7 |
germ cell | 3.48e-40 | 7 |
embryonic stem cell | 1.18e-27 | 5 |
non-classical monocyte | 1.73e-18 | 3 |
CD14-low, CD16-positive monocyte | 1.73e-18 | 3 |
CD1a-positive Langerhans cell | 3.92e-12 | 2 |
immature CD1a-positive Langerhans cell | 3.92e-12 | 2 |
intermediate monocyte | 1.97e-10 | 9 |
CD14-positive, CD16-positive monocyte | 1.97e-10 | 9 |
neuron | 4.16e-09 | 6 |
neuroblast | 4.16e-09 | 6 |
electrically signaling cell | 4.16e-09 | 6 |
neuronal stem cell | 6.18e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
testis | 5.77e-12 | 8 |
spleen | 9.43e-09 | 3 |
gastrointestinal system mesentery | 9.43e-09 | 3 |
stomach region | 9.43e-09 | 3 |
mesentery | 9.43e-09 | 3 |
gastrointestinal system serosa | 9.43e-09 | 3 |
mesentery of stomach | 9.43e-09 | 3 |
gut mesentery | 9.43e-09 | 3 |
dorsal mesentery | 9.43e-09 | 3 |
dorsal mesogastrium | 9.43e-09 | 3 |
peritoneal cavity | 9.43e-09 | 3 |
spleen primordium | 9.43e-09 | 3 |
male reproductive organ | 1.01e-08 | 11 |
body cavity | 1.37e-08 | 46 |
body cavity or lining | 5.68e-08 | 49 |
body cavity precursor | 4.26e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.21e-19 | 22 |
germ cell cancer | 1.21e-19 | 22 |
islet cell tumor | 4.01e-07 | 1 |
endocrine pancreas cancer | 4.01e-07 | 1 |
pancreatic endocrine carcinoma | 4.01e-07 | 1 |