FFCP PHASE1:Hg19::chr21:45788930..45788938,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7226 | |EntrezGene=7226 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12339 | |HGNC=12339 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-65bp_to_ENST00000498430,uc002zex.1_5end | |association_with_transcript=-65bp_to_ENST00000498430,uc002zex.1_5end | ||
|cluster_id=chr21:45788930..45788938,+ | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_18_at_TRPM2_5end | |description=CAGE_peak_18_at_TRPM2_5end | ||
|id=chr21:45788930..45788938,+ | |id=chr21:45788930..45788938,+ | ||
|ontology_enrichment_celltype=CL:0002553!6.47e-17!1;CL:0000946!2.63e-16!1;CL:0000786!2.63e-16!1;CL:0000980!2.63e-16!1;CL:0000039!8.72e-10!7;CL:0000586!8.72e-10!7;CL:0000785!8.09e-09!2;CL:0000955!8.09e-09!2;CL:0000818!8.09e-09!2;CL:0000954!8.09e-09!2;CL:0000816!8.09e-09!2 | |ontology_enrichment_celltype=CL:0002553!6.47e-17!1;CL:0000946!2.63e-16!1;CL:0000786!2.63e-16!1;CL:0000980!2.63e-16!1;CL:0000039!8.72e-10!7;CL:0000586!8.72e-10!7;CL:0000785!8.09e-09!2;CL:0000955!8.09e-09!2;CL:0000818!8.09e-09!2;CL:0000954!8.09e-09!2;CL:0000816!8.09e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.65e-15;7!CL:0000586;1.65e-15;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.65e-15,7;CL:0000586,1.65e-15,7 | |||
|ontology_enrichment_development_v019=UBERON:0010122;4.52e-50;2!UBERON:0009117;2.73e-11;10!UBERON:0005564;2.73e-11;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009663!1.51e-35!7;UBERON:0000369!2.36e-35!4;UBERON:0002435!2.36e-35!4;UBERON:0000204!2.36e-35!4;UBERON:0010082!2.36e-35!4;UBERON:0002308!9.31e-28!9;UBERON:0002420!9.31e-28!9;UBERON:0000125!9.31e-28!9;UBERON:0007245!9.31e-28!9;UBERON:0010009!9.31e-28!9;UBERON:0010011!9.31e-28!9;UBERON:0000454!9.31e-28!9;UBERON:0005383!1.05e-21!3;UBERON:0005382!1.05e-21!3;UBERON:0002780!2.12e-17!41;UBERON:0001890!2.12e-17!41;UBERON:0006240!2.12e-17!41;UBERON:0003080!5.49e-17!42;UBERON:0001874!7.57e-17!1;UBERON:0001882!1.04e-16!1;UBERON:0005403!1.04e-16!1;UBERON:0002022!1.93e-16!1;UBERON:0001049!3.03e-16!57;UBERON:0005068!3.03e-16!57;UBERON:0006241!3.03e-16!57;UBERON:0007135!3.03e-16!57;UBERON:0002616!1.10e-15!59;UBERON:0000955!3.69e-13!69;UBERON:0006238!3.69e-13!69;UBERON:0001869!1.06e-11!32;UBERON:0003056!1.18e-11!61;UBERON:0002791!2.35e-11!33;UBERON:0002020!4.95e-11!34;UBERON:0003528!4.95e-11!34;UBERON:0001893!4.95e-11!34;UBERON:0001017!5.05e-11!82;UBERON:0003075!1.28e-10!86;UBERON:0007284!1.28e-10!86;UBERON:0005743!1.72e-10!86;UBERON:0002346!4.01e-10!90;UBERON:0001894!1.41e-09!7;UBERON:0006222!1.41e-09!7;UBERON:0000073!1.87e-09!94;UBERON:0001016!1.87e-09!94;UBERON:0001873!3.71e-09!2;UBERON:0010122!3.71e-09!2;UBERON:0001875!4.70e-09!2;UBERON:0006514!4.70e-09!2;UBERON:0001897!8.74e-09!2;UBERON:0000473!1.13e-08!8;UBERON:0007023!7.28e-08!115;UBERON:0000033!3.55e-07!123;UBERON:0000153!8.18e-07!129;UBERON:0007811!8.18e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001873;4.52e-50;2!UBERON:0005383;5.96e-34;3!UBERON:0005382;5.96e-34;3!UBERON:0000369;7.14e-26;4!UBERON:0002435;7.14e-26;4!UBERON:0000204;7.14e-26;4!UBERON:0009663;1.91e-15;7!UBERON:0000473;9.39e-14;8!UBERON:0002420;2.45e-12;9!UBERON:0000125;2.45e-12;9!UBERON:0007245;2.45e-12;9!UBERON:0002308;2.45e-12;9!UBERON:0010009;2.45e-12;9!UBERON:0010011;2.45e-12;9!UBERON:0000454;2.45e-12;9!UBERON:0003135;2.16e-10;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,4.52e-50,2;UBERON:0010122,4.52e-50,2;UBERON:0005383,5.96e-34,3;UBERON:0005382,5.96e-34,3;UBERON:0000369,7.14e-26,4;UBERON:0002435,7.14e-26,4;UBERON:0000204,7.14e-26,4;UBERON:0010082,7.14e-26,4;UBERON:0009663,1.91e-15,7;UBERON:0000473,9.39e-14,8;UBERON:0002420,2.45e-12,9;UBERON:0000125,2.45e-12,9;UBERON:0007245,2.45e-12,9;UBERON:0002308,2.45e-12,9;UBERON:0010009,2.45e-12,9;UBERON:0010011,2.45e-12,9;UBERON:0000454,2.45e-12,9;UBERON:0003135,2.16e-10,11 | |||
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|short_description=p18@TRPM2 | |short_description=p18@TRPM2 | ||
}} | }} |
Latest revision as of 18:53, 18 September 2015
Short description: | p18@TRPM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_TRPM2_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | -65bp_to_ENST00000498430, uc002zex.1_5end |
EntrezGene: | TRPM2 |
HGNC: | 12339 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.65e-15 | 7 |
germ cell | 1.65e-15 | 7 |
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 4.52e-50 | 2 |
future caudate nucleus | 4.52e-50 | 2 |
caudate-putamen | 5.96e-34 | 3 |
dorsal striatum | 5.96e-34 | 3 |
corpus striatum | 7.14e-26 | 4 |
striatum | 7.14e-26 | 4 |
ventral part of telencephalon | 7.14e-26 | 4 |
future corpus striatum | 7.14e-26 | 4 |
telencephalic nucleus | 1.91e-15 | 7 |
testis | 9.39e-14 | 8 |
basal ganglion | 2.45e-12 | 9 |
neural nucleus | 2.45e-12 | 9 |
nuclear complex of neuraxis | 2.45e-12 | 9 |
nucleus of brain | 2.45e-12 | 9 |
aggregate regional part of brain | 2.45e-12 | 9 |
collection of basal ganglia | 2.45e-12 | 9 |
cerebral subcortex | 2.45e-12 | 9 |
male reproductive organ | 2.16e-10 | 11 |