FFCP PHASE1:Hg19::chr7:45927978..45927999,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3484 | |EntrezGene=3484 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5469 | |HGNC=5469 | ||
|TSSclassifier=strong | |||
|UniProt=C9JXF9,C1K3N3,P08833 | |UniProt=C9JXF9,C1K3N3,P08833 | ||
|association_with_transcript=19bp_to_ENST00000457280,NM_000596,uc003tno.3,uc003tnp.2,uc010kyn.2_5end | |association_with_transcript=19bp_to_ENST00000457280,NM_000596,uc003tno.3,uc003tnp.2,uc010kyn.2_5end | ||
|cluster_id=chr7:45927978..45927999,+ | |||
|coexpression_cluster_id=C4688 | |||
|description=CAGE_peak_2_at_IGFBP1_5end | |description=CAGE_peak_2_at_IGFBP1_5end | ||
|id=chr7:45927978..45927999,+ | |id=chr7:45927978..45927999,+ | ||
|ontology_enrichment_celltype=CL:0000181!3.52e-08!12;CL:0000417!3.52e-08!12;CL:0000668!3.52e-08!12;CL:0000414!3.52e-08!12;CL:0000412!3.52e-08!12;CL:0000182!3.52e-08!12;CL:0000327!5.30e-07!14 | |ontology_enrichment_celltype=CL:0000181!3.52e-08!12;CL:0000417!3.52e-08!12;CL:0000668!3.52e-08!12;CL:0000414!3.52e-08!12;CL:0000412!3.52e-08!12;CL:0000182!3.52e-08!12;CL:0000327!5.30e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000708;5.09e-19;3!CL:0000327;3.28e-14;15!CL:0002575;2.64e-13;2!CL:0000138;8.97e-10;6!CL:0002541;3.11e-09;3!CL:0000499;2.35e-07;28!CL:0002379;3.00e-07;1!CL:0000669;4.49e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,6.53e-19,3;CL:0000327,4.91e-14,15;CL:0002575,2.64e-13,2;CL:0000058,1.33e-09,6;CL:0000138,1.33e-09,6;CL:0002541,2.87e-09,3;CL:0002379,1.95e-07,1;CL:0000499,2.88e-07,28;CL:0000669,4.49e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;7.03e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;3.00e-07;1!DOID:3565;3.00e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.95e-07,1;DOID:3565,1.95e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001041!3.95e-10!98;UBERON:0000949!1.31e-08!45;UBERON:0000466!2.04e-08!126;UBERON:0005177!4.72e-08!107;UBERON:0005057!9.11e-08!26;UBERON:0005172!1.62e-07!55;UBERON:0005173!1.62e-07!55;UBERON:0002107!2.02e-07!19;UBERON:0006925!2.02e-07!19;UBERON:0008836!2.02e-07!19;UBERON:0008835!3.52e-07!22;UBERON:0003894!3.52e-07!22;UBERON:0003104!4.53e-07!238;UBERON:0009142!4.53e-07!238;UBERON:0003886!5.39e-07!63;UBERON:0001048!9.20e-07!168;UBERON:0009854!9.43e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0003210;5.09e-19;3!UBERON:0001264;6.50e-10;10!UBERON:0003124;3.11e-09;3!UBERON:0000920;3.11e-09;3!UBERON:0000949;1.25e-08;43!UBERON:0002107;6.49e-08;19!UBERON:0006925;6.49e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,6.53e-19,3;UBERON:0001264,6.07e-10,10;UBERON:0000949,1.41e-09,45;UBERON:0000920,2.87e-09,3;UBERON:0003124,1.09e-08,7;UBERON:0002107,5.75e-08,19;UBERON:0006925,5.75e-08,19;UBERON:0008836,5.75e-08,19;UBERON:0005177,1.25e-07,101;UBERON:0008835,7.63e-07,22;UBERON:0003894,7.63e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0.662794751455832,0,0,0.730310090387373,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1686349143074,1.00267582127178,2.02785126545153,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.267899184852239,0,0.337834441449967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.756787138224657,1.72852777344,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.330881918197182,0.435758888184812,0.71181185733329,0,0.196221465125346,0,1.4763109092493,0,0,0,2.53510069643662,0.982827216677626,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5790149399433,1.30788020649984,2.0534720029866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79249710983165,2.29723871668228,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.813795071099207,0,0,0,0,0,0,1.03473071292505,0,0,0,3.72022199179207,1.37257369524342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0.451199612907412,0.15403067420883,1.56869953835371,0,0.316654886678627,1.13733384070897,0,0.215915916102139,0,0,0,0.509752546090077,1.66215201785745,0.223874754722178,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,1.116475108079,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.25103363222567,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,1.32930774541437,1.323967823502,1.88359751044335,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,3.19695375331408,0.72045208577053,0,0.686379991447858,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0,0,0,0,0.429226048136571,0,0.134366944973453,0,0,0.472699093843342,0.494495150286999,0.404421263125109,0.78741985211799,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0.179287339332845,0.575745591958336,0,0,0,0,0,0,0,0,0,0,1.75862680413699,7.95041333473328,0,0,2.9084762440336,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,1.88212655758537,0,0,0,0,0,0.189403005275089,0.50313580350515,3.55924488638614,0,0.302461847526478,0,0.147855149989634,0,0,0,0,0,0.521745061811734,0,0,0,0,0.429642228169954,0.464033759878494,0.398095888698616,0.800055529326307,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0.245772908753719,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,1.65462722368366,0,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,10.4668796791914,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93061915699296,0,0.111855431797792,0,0.487671699929078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.129177819672012,0.124149428591716,0,0,0,0,0.342233301085281,0,0,0.332660356546013,0.0814032686109745,0,0,17.3362640065713,0,0.977931553462932,0,0,0.201273793591026,0 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| ||
|short_description=p2@IGFBP1 | |short_description=p2@IGFBP1 | ||
}} | }} |
Latest revision as of 19:02, 18 September 2015
Short description: | p2@IGFBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IGFBP1_5end |
Coexpression cluster: | C4688_tubular_placenta_chorionic_liver_Multipotent_lung_mesenchymal |
Association with transcript: | 19bp_to_ENST00000457280, NM_000596, uc003tno.3, uc003tnp.2, uc010kyn.2_5end |
EntrezGene: | IGFBP1 |
HGNC: | 5469 |
UniProt: | C9JXF9C1K3N3P08833 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 6.53e-19 | 3 |
extracellular matrix secreting cell | 4.91e-14 | 15 |
central nervous system pericyte | 2.64e-13 | 2 |
chondroblast | 1.33e-09 | 6 |
chondrocyte | 1.33e-09 | 6 |
chorionic membrane mesenchymal stem cell | 2.87e-09 | 3 |
meningothelial cell | 1.95e-07 | 1 |
stromal cell | 2.88e-07 | 28 |
pericyte cell | 4.49e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 6.53e-19 | 3 |
pancreas | 6.07e-10 | 10 |
endocrine system | 1.41e-09 | 45 |
egg chorion | 2.87e-09 | 3 |
chorion | 1.09e-08 | 7 |
liver | 5.75e-08 | 19 |
digestive gland | 5.75e-08 | 19 |
liver bud | 5.75e-08 | 19 |
trunk region element | 1.25e-07 | 101 |
hepatic diverticulum | 7.63e-07 | 22 |
liver primordium | 7.63e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.95e-07 | 1 |
meningioma | 1.95e-07 | 1 |