FFCP PHASE1:Hg19::chr5:76788037..76788098,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:76788037..76788098,-
|short_description=p1@WDR41
|description=CAGE_peak_1_at_WDR41_5end
|association_with_transcript=0bp_to_ENST00000506307,ENST00000506474...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55255 | |EntrezGene=55255 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25601 | |HGNC=25601 | ||
|TSSclassifier=strong | |||
|UniProt=D6RB94,D6RIX6,B4DHS8,D6RA22,D6RE66 | |UniProt=D6RB94,D6RIX6,B4DHS8,D6RA22,D6RE66 | ||
|association_with_transcript=0bp_to_ENST00000506307,ENST00000506474,ENST00000507239,ENST00000507452,ENST00000509701,ENST00000509892,ENST00000513417,ENST00000514559,ENST00000515321_5end | |||
|cluster_id=chr5:76788037..76788098,- | |||
|description=CAGE_peak_1_at_WDR41_5end | |||
|id=chr5:76788037..76788098,- | |||
|ontology_enrichment_celltype=CL:0002371!1.17e-13!591;CL:0000723!6.50e-13!436;CL:0000048!1.22e-12!430;CL:0000144!1.40e-12!625;CL:0000034!3.21e-12!444;CL:0000012!1.39e-11!682;CL:0000548!2.41e-11!679;CL:0000004!2.41e-11!679;CL:0000255!2.41e-11!679;CL:0000055!3.04e-11!180;CL:0000057!1.01e-09!75;CL:0002320!4.24e-09!365;CL:0000134!1.88e-08!358;CL:0002620!2.84e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.97e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,5.32e-14,433;CL:0000048,1.02e-13,427;CL:0000034,2.85e-13,441;CL:0000057,3.73e-10,76;CL:0002320,6.00e-10,361;CL:0000134,2.87e-09,354;CL:0000219,2.37e-07,386;CL:0002620,2.84e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.16e-09!375;UBERON:0003102!6.06e-09!95;UBERON:0002199!9.91e-09!45;UBERON:0002416!9.91e-09!45;UBERON:0002097!2.17e-07!40;UBERON:0000914!4.29e-07!83;UBERON:0002329!4.29e-07!83;UBERON:0003077!4.29e-07!83;UBERON:0003059!4.29e-07!83;UBERON:0007282!4.29e-07!83;UBERON:0009618!4.29e-07!83;UBERON:0007285!4.29e-07!83;UBERON:0002204!8.22e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.01e-10,371;UBERON:0003102,3.90e-10,99;UBERON:0002199,4.90e-09,46;UBERON:0002416,4.90e-09,46;UBERON:0002204,7.62e-08,167;UBERON:0002097,1.09e-07,41 | |||
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3 | ||
|short_description=p1@WDR41 | |||
}} | }} |
Latest revision as of 19:24, 18 September 2015
Short description: | p1@WDR41 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_WDR41_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000506307, ENST00000506474, ENST00000507239, ENST00000507452, ENST00000509701, ENST00000509892, ENST00000513417, ENST00000514559, ENST00000515321_5end |
EntrezGene: | WDR41 |
HGNC: | 25601 |
UniProt: | D6RB94D6RIX6B4DHS8D6RA22D6RE66 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 5.32e-14 | 433 |
multi fate stem cell | 1.02e-13 | 427 |
stem cell | 2.85e-13 | 441 |
fibroblast | 3.73e-10 | 76 |
connective tissue cell | 6.00e-10 | 361 |
mesenchymal cell | 2.87e-09 | 354 |
motile cell | 2.37e-07 | 386 |
skin fibroblast | 2.84e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.01e-10 | 371 |
surface structure | 3.90e-10 | 99 |
integument | 4.90e-09 | 46 |
integumental system | 4.90e-09 | 46 |
musculoskeletal system | 7.62e-08 | 167 |
skin of body | 1.09e-07 | 41 |