FFCP PHASE1:Hg19::chr1:6269448..6269459,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:6269448..6269459,-
|short_description=p10@RPL22
|description=CAGE_peak_10_at_RPL22_5end
|association_with_transcript=0bp_to_ENST00000465335_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6146 | |EntrezGene=6146 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10315 | |HGNC=10315 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000465335_5end | |||
|cluster_id=chr1:6269448..6269459,- | |||
|description=CAGE_peak_10_at_RPL22_5end | |||
|id=chr1:6269448..6269459,- | |||
|ontology_enrichment_celltype=CL:0000055!5.15e-09!180 | |||
|ontology_enrichment_celltype_v019=CL:0000228;4.10e-23;1!CL:0002372;4.10e-23;1!CL:0002535;2.90e-12;2!CL:0002521;9.66e-09;3!CL:0000632;1.30e-08;3!CL:0002579;1.30e-08;3!CL:0000214;1.30e-08;3!CL:0000327;8.83e-07;15!CL:0000056;9.10e-07;4!CL:0000737;9.10e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,5.13e-23,1;CL:0002372,5.13e-23,1;CL:0002535,2.32e-12,2;CL:0002521,8.96e-09,3;CL:0002579,1.21e-08,3;CL:0000632,1.30e-08,3;CL:0000214,1.51e-08,3;CL:0000327,9.36e-07,15;CL:0000737,9.63e-07,4;CL:0000515,9.63e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;9.10e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!3.30e-09!69;UBERON:0006238!3.30e-09!69;UBERON:0002616!4.03e-08!59;UBERON:0001017!2.29e-07!82;UBERON:0005743!2.60e-07!86;UBERON:0000073!3.01e-07!94;UBERON:0001016!3.01e-07!94;UBERON:0001049!6.66e-07!57;UBERON:0005068!6.66e-07!57;UBERON:0006241!6.66e-07!57;UBERON:0007135!6.66e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;2.90e-12;2!UBERON:0004801;2.90e-12;2!UBERON:0004457;1.07e-10;9!UBERON:0000042;1.07e-10;9!UBERON:0002190;9.66e-09;3!UBERON:0006915;1.30e-08;3!UBERON:0007616;1.30e-08;3!UBERON:0002217;1.30e-08;3!UBERON:0002018;1.30e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,2.32e-12,2;UBERON:0004801,2.32e-12,2;UBERON:0002190,8.96e-09,3;UBERON:0006915,1.51e-08,3;UBERON:0007616,1.51e-08,3;UBERON:0002217,1.51e-08,3;UBERON:0002018,1.51e-08,3;UBERON:0004457,3.07e-08,12;UBERON:0000042,3.07e-08,12 | |||
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| ||
|short_description=p10@RPL22 | |||
}} | }} |
Latest revision as of 19:40, 18 September 2015
Short description: | p10@RPL22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RPL22_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000465335_5end |
EntrezGene: | RPL22 |
HGNC: | 10315 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 5.13e-23 | 1 |
myotube | 5.13e-23 | 1 |
epithelial cell of cervix | 2.32e-12 | 2 |
subcutaneous fat cell | 8.96e-09 | 3 |
omentum preadipocyte | 1.21e-08 | 3 |
hepatic stellate cell | 1.30e-08 | 3 |
synovial cell | 1.51e-08 | 3 |
extracellular matrix secreting cell | 9.36e-07 | 15 |
striated muscle cell | 9.63e-07 | 4 |
skeletal muscle myoblast | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 2.32e-12 | 2 |
cervix epithelium | 2.32e-12 | 2 |
subcutaneous adipose tissue | 8.96e-09 | 3 |
stratified squamous epithelium | 1.51e-08 | 3 |
layer of synovial tissue | 1.51e-08 | 3 |
synovial joint | 1.51e-08 | 3 |
synovial membrane of synovial joint | 1.51e-08 | 3 |
cavity lining | 3.07e-08 | 12 |
serous membrane | 3.07e-08 | 12 |