FFCP PHASE1:Hg19::chr21:46313414..46313448,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3689 | |EntrezGene=3689 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6155 | |HGNC=6155 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=493bp_to_ENST00000475170_5end | |association_with_transcript=493bp_to_ENST00000475170_5end | ||
|cluster_id=chr21:46313414..46313448,- | |||
|coexpression_cluster_id=C329 | |coexpression_cluster_id=C329 | ||
|description=CAGE_peak_8_at_ITGB2_5end | |description=CAGE_peak_8_at_ITGB2_5end | ||
Latest revision as of 19:46, 18 September 2015
| Short description: | p8@ITGB2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_8_at_ITGB2_5end |
| Coexpression cluster: | C329_Neutrophils_CD14_Monocytederived_Whole_Peripheral_CD14CD16_Eosinophils |
| Association with transcript: | 493bp_to_ENST00000475170_5end |
| EntrezGene: | ITGB2 |
| HGNC: | 6155 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p8@ITGB2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| defensive cell | 1.89e-106 | 48 |
| phagocyte | 1.89e-106 | 48 |
| monopoietic cell | 5.34e-100 | 59 |
| monocyte | 5.34e-100 | 59 |
| monoblast | 5.34e-100 | 59 |
| promonocyte | 5.34e-100 | 59 |
| myeloid leukocyte | 9.01e-100 | 72 |
| macrophage dendritic cell progenitor | 2.26e-96 | 61 |
| classical monocyte | 4.72e-95 | 42 |
| CD14-positive, CD16-negative classical monocyte | 4.72e-95 | 42 |
Showing 1 to 10 of 35 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 1.59e-75 | 98 |
| blood island | 1.59e-75 | 98 |
| bone marrow | 3.57e-75 | 76 |
| bone element | 7.70e-69 | 82 |
| hemolymphoid system | 2.32e-67 | 108 |
| skeletal element | 1.07e-61 | 90 |
| immune system | 2.49e-59 | 93 |
| skeletal system | 2.33e-54 | 100 |
| lateral plate mesoderm | 9.63e-30 | 203 |
| musculoskeletal system | 8.87e-28 | 167 |
Showing 1 to 10 of 17 entries
