FFCP PHASE1:Hg19::chr11:62369108..62369183,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:62369108..62369183,- to FFCP PHASE1:Hg19::chr11:62369108..62369183,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9219 | |EntrezGene=9219 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7411 | |HGNC=7411 | ||
|TSSclassifier=strong | |||
|UniProt=O94776 | |UniProt=O94776 | ||
|association_with_transcript=119bp_to_uc001ntq.1_5end | |||
|cluster_id=chr11:62369108..62369183,- | |||
|description=CAGE_peak_3_at_MTA2_5end | |||
|id=chr11:62369108..62369183,- | |||
|ontology_enrichment_celltype=CL:0000012!2.44e-23!682;CL:0000548!3.69e-22!679;CL:0000004!3.69e-22!679;CL:0000255!3.69e-22!679;CL:0000066!1.16e-19!254;CL:0000144!1.17e-17!625;CL:0002321!3.59e-16!248;CL:0002371!7.23e-16!591;CL:0000220!1.55e-15!246;CL:0000003!6.14e-14!722;CL:0000063!2.74e-12!578;CL:0000115!1.32e-10!35;CL:0002139!2.59e-09!24;CL:0000076!3.10e-09!62;CL:0002078!2.09e-08!44;CL:0000071!2.52e-08!18;CL:0002546!2.52e-08!18;CL:1000449!3.06e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.49e-09;24!CL:0000115;2.64e-09;36!CL:0000071;2.22e-08;18!CL:1000449;1.20e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.04e-19,253;CL:0002321,2.01e-16,250;CL:0000115,5.68e-11,36;CL:0002139,2.59e-09,24;CL:0000076,7.48e-09,63;CL:0002078,9.71e-09,45;CL:0000071,2.52e-08,18;CL:0002546,2.52e-08,18;CL:1000449,1.25e-07,15;CL:0000213,5.90e-07,58;CL:0000215,5.90e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;2.22e-08;18 | |||
|ontology_enrichment_disease=DOID:2531!5.32e-17!51;DOID:0060083!5.32e-17!51;DOID:1240!9.60e-15!39;DOID:8692!4.62e-14!31;DOID:0050686!4.49e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.12e-13;31!DOID:1240;8.50e-12;39!DOID:2531;1.09e-10;51!DOID:0060083;1.09e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.32e-17,51;DOID:0060083,5.32e-17,51;DOID:1240,9.60e-15,39;DOID:8692,4.62e-14,31;DOID:0050686,4.49e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0001986!2.52e-08!18;UBERON:0004638!2.52e-08!18;UBERON:0004852!2.52e-08!18;UBERON:0000487!8.79e-08!22;UBERON:0004211!3.06e-07!16;UBERON:0001285!3.06e-07!16;UBERON:0007684!3.06e-07!16;UBERON:0003220!3.06e-07!16;UBERON:0004208!3.06e-07!16;UBERON:0006555!6.83e-07!17;UBERON:0005103!6.83e-07!17;UBERON:0000083!6.83e-07!17;UBERON:0009201!6.83e-07!17;UBERON:0004819!6.83e-07!17;UBERON:0006553!6.83e-07!17;UBERON:0003074!6.83e-07!17;UBERON:0003060!6.83e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.22e-08;18!UBERON:0001986;2.22e-08;18!UBERON:0004852;2.22e-08;18!UBERON:0000490;6.67e-08;33!UBERON:0000487;7.37e-08;22!UBERON:0006555;1.20e-07;15!UBERON:0004819;1.20e-07;15!UBERON:0001285;1.20e-07;15!UBERON:0007684;1.20e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.52e-08,18;UBERON:0001986,2.52e-08,18;UBERON:0004852,2.52e-08,18;UBERON:0000487,8.79e-08,22;UBERON:0004211,1.25e-07,15;UBERON:0009773,1.25e-07,15;UBERON:0001231,1.25e-07,15;UBERON:0001285,1.25e-07,15;UBERON:0007684,1.25e-07,15;UBERON:0004208,1.25e-07,15;UBERON:0006555,3.09e-07,16;UBERON:0004819,3.09e-07,16 | |||
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| ||
|short_description=p3@MTA2 | |||
}} | }} |
Latest revision as of 20:00, 18 September 2015
Short description: | p3@MTA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MTA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 119bp_to_uc001ntq.1_5end |
EntrezGene: | MTA2 |
HGNC: | 7411 |
UniProt: | O94776 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.04e-19 | 253 |
embryonic cell | 2.01e-16 | 250 |
endothelial cell | 5.68e-11 | 36 |
endothelial cell of vascular tree | 2.59e-09 | 24 |
squamous epithelial cell | 7.48e-09 | 63 |
meso-epithelial cell | 9.71e-09 | 45 |
blood vessel endothelial cell | 2.52e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.52e-08 | 18 |
epithelial cell of nephron | 1.25e-07 | 15 |
lining cell | 5.90e-07 | 58 |
barrier cell | 5.90e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.52e-08 | 18 |
endothelium | 2.52e-08 | 18 |
cardiovascular system endothelium | 2.52e-08 | 18 |
simple squamous epithelium | 8.79e-08 | 22 |
nephron epithelium | 1.25e-07 | 15 |
renal tubule | 1.25e-07 | 15 |
nephron tubule | 1.25e-07 | 15 |
nephron | 1.25e-07 | 15 |
uriniferous tubule | 1.25e-07 | 15 |
nephrogenic mesenchyme | 1.25e-07 | 15 |
excretory tube | 3.09e-07 | 16 |
kidney epithelium | 3.09e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.32e-17 | 51 |
immune system cancer | 5.32e-17 | 51 |
leukemia | 9.60e-15 | 39 |
myeloid leukemia | 4.62e-14 | 31 |
organ system cancer | 4.49e-07 | 137 |