FFCP PHASE1:Hg19::chr21:46493752..46493757,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:46493752..46493757,+
|short_description=p2@ADARB1
|description=CAGE_peak_2_at_ADARB1_5end
|association_with_transcript=-10bp_to_ENST00000462214_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=104 | |EntrezGene=104 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=226 | |HGNC=226 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_ENST00000462214_5end | |||
|cluster_id=chr21:46493752..46493757,+ | |||
|description=CAGE_peak_2_at_ADARB1_5end | |||
|id=chr21:46493752..46493757,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.45e-27!254;CL:0002321!4.12e-12!248;CL:0000220!1.58e-11!246;CL:0000223!4.62e-10!59;CL:0002076!3.82e-08!43;CL:0002368!3.19e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002368;3.43e-08;13!CL:0002076;4.20e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.92e-26,253;CL:0002321,6.52e-10,250;CL:0000223,7.03e-10,58;CL:0002076,5.03e-09,42;CL:0002368,1.85e-08,13;CL:0002202,6.95e-07,9;CL:0002632,6.95e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!7.97e-15!143;DOID:305!1.02e-13!106;DOID:162!8.50e-11!235;DOID:14566!4.38e-10!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.43e-14,143;DOID:305,5.20e-13,106;DOID:162,1.50e-09,235;DOID:14566,3.39e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0001048!8.80e-13!168;UBERON:0000481!9.82e-12!347;UBERON:0004119!1.92e-11!169;UBERON:0000925!1.92e-11!169;UBERON:0006595!1.92e-11!169;UBERON:0003104!3.86e-10!238;UBERON:0009142!3.86e-10!238;UBERON:0005177!1.00e-09!107;UBERON:0000119!3.72e-09!312;UBERON:0000483!1.24e-08!309;UBERON:0000466!1.62e-08!126;UBERON:0000077!2.86e-08!130;UBERON:0001007!3.59e-08!155;UBERON:0001555!3.59e-08!155;UBERON:0007026!3.59e-08!155;UBERON:0004921!7.38e-08!129;UBERON:0004185!7.38e-08!129;UBERON:0000464!5.61e-07!104;UBERON:0001041!6.50e-07!98;UBERON:0000064!7.90e-07!219 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.20e-08,101;UBERON:0001048,1.81e-08,160;UBERON:0004119,2.37e-07,160;UBERON:0000925,2.37e-07,160;UBERON:0006595,2.37e-07,160;UBERON:0006554,2.61e-07,47;UBERON:0001008,6.21e-07,48 | |||
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| ||
|short_description=p2@ADARB1 | |||
}} | }} |
Latest revision as of 20:24, 18 September 2015
Short description: | p2@ADARB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ADARB1_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_ENST00000462214_5end |
EntrezGene: | ADARB1 |
HGNC: | 226 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.92e-26 | 253 |
embryonic cell | 6.52e-10 | 250 |
endodermal cell | 7.03e-10 | 58 |
endo-epithelial cell | 5.03e-09 | 42 |
respiratory epithelial cell | 1.85e-08 | 13 |
epithelial cell of tracheobronchial tree | 6.95e-07 | 9 |
epithelial cell of lower respiratory tract | 6.95e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 1.20e-08 | 101 |
primordium | 1.81e-08 | 160 |
endoderm-derived structure | 2.37e-07 | 160 |
endoderm | 2.37e-07 | 160 |
presumptive endoderm | 2.37e-07 | 160 |
urinary system structure | 2.61e-07 | 47 |
renal system | 6.21e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.43e-14 | 143 |
carcinoma | 5.20e-13 | 106 |
cancer | 1.50e-09 | 235 |
disease of cellular proliferation | 3.39e-09 | 239 |