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FFCP PHASE1:Hg19::chr12:52401484..52401505,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=692159
|EntrezGene=692159
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=32680
|HGNC=32680
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=-45bp_to_BC028005_5end
|association_with_transcript=-45bp_to_BC028005_5end
|cluster_id=chr12:52401484..52401505,-
|coexpression_cluster_id=C325
|coexpression_cluster_id=C325
|description=CAGE_peak_1_at_GRASPOS_5end
|description=CAGE_peak_1_at_GRASPOS_5end
|id=chr12:52401484..52401505,-
|id=chr12:52401484..52401505,-
|ontology_enrichment_celltype=CL:0000738!2.28e-42!140;CL:0000037!2.58e-31!172;CL:0000566!2.58e-31!172;CL:0002031!3.43e-31!124;CL:0002057!1.10e-28!42;CL:0000766!2.12e-28!76;CL:0000988!2.43e-28!182;CL:0002087!5.54e-28!119;CL:0002032!3.12e-26!165;CL:0000837!3.12e-26!165;CL:0000860!4.59e-26!45;CL:0000557!7.06e-23!71;CL:0000839!1.81e-20!70;CL:0002009!2.20e-18!65;CL:0000763!6.82e-17!112;CL:0000049!6.82e-17!112;CL:0002194!1.47e-16!63;CL:0000576!1.47e-16!63;CL:0000040!1.47e-16!63;CL:0000559!1.47e-16!63;CL:0002393!2.77e-15!9;CL:0002397!2.77e-15!9;CL:0000094!8.82e-10!8;CL:0000838!3.06e-09!52;CL:0000542!5.99e-09!53;CL:0000051!5.99e-09!53;CL:0000791!1.63e-08!18;CL:0000789!1.63e-08!18;CL:0002420!1.63e-08!18;CL:0002419!1.63e-08!18;CL:0000790!1.63e-08!18;CL:0002274!2.17e-08!5;CL:0000457!2.17e-08!5;CL:0002191!2.17e-08!5;CL:0000097!2.17e-08!5;CL:0000831!2.17e-08!5;CL:0002028!2.17e-08!5;CL:0000625!5.13e-08!11
|ontology_enrichment_celltype=CL:0000738!2.28e-42!140;CL:0000037!2.58e-31!172;CL:0000566!2.58e-31!172;CL:0002031!3.43e-31!124;CL:0002057!1.10e-28!42;CL:0000766!2.12e-28!76;CL:0000988!2.43e-28!182;CL:0002087!5.54e-28!119;CL:0002032!3.12e-26!165;CL:0000837!3.12e-26!165;CL:0000860!4.59e-26!45;CL:0000557!7.06e-23!71;CL:0000839!1.81e-20!70;CL:0002009!2.20e-18!65;CL:0000763!6.82e-17!112;CL:0000049!6.82e-17!112;CL:0002194!1.47e-16!63;CL:0000576!1.47e-16!63;CL:0000040!1.47e-16!63;CL:0000559!1.47e-16!63;CL:0002393!2.77e-15!9;CL:0002397!2.77e-15!9;CL:0000094!8.82e-10!8;CL:0000838!3.06e-09!52;CL:0000542!5.99e-09!53;CL:0000051!5.99e-09!53;CL:0000791!1.63e-08!18;CL:0000789!1.63e-08!18;CL:0002420!1.63e-08!18;CL:0002419!1.63e-08!18;CL:0000790!1.63e-08!18;CL:0002274!2.17e-08!5;CL:0000457!2.17e-08!5;CL:0002191!2.17e-08!5;CL:0000097!2.17e-08!5;CL:0000831!2.17e-08!5;CL:0002028!2.17e-08!5;CL:0000625!5.13e-08!11
|ontology_enrichment_celltype_v019=CL:0002393;2.11e-26;6!CL:0002397;2.11e-26;6!CL:0000766;5.53e-17;69!CL:0000576;3.01e-16;48!CL:0000623;1.89e-14;3!CL:0002087;3.93e-14;104!CL:0000226;5.58e-14;3!CL:0000842;5.58e-14;3!CL:0000875;1.07e-13;3!CL:0002396;1.07e-13;3!CL:0000771;1.79e-10;2!CL:0000738;2.37e-10;136!CL:0000860;9.20e-10;33!CL:0002057;9.20e-10;33!CL:0000097;5.38e-09;5!CL:0000542;4.76e-08;53!CL:0000236;6.76e-08;13!CL:0000791;7.66e-08;18!CL:0000789;7.66e-08;18!CL:0002419;7.66e-08;18!CL:0000473;2.01e-07;39!CL:0000234;2.01e-07;39!CL:0000988;2.10e-07;177
|ontology_enrichment_celltype_v019_2=CL:0000738,3.53e-50,136;CL:0002087,4.08e-40,115;CL:0000037,4.85e-39,168;CL:0002393,2.60e-38,9;CL:0002397,2.60e-38,9;CL:0002031,2.67e-38,120;CL:0000988,1.25e-36,177;CL:0002032,1.68e-32,161;CL:0000837,1.68e-32,161;CL:0000860,3.59e-32,42;CL:0002057,3.59e-32,42;CL:0000766,2.45e-31,72;CL:0000473,1.40e-27,48;CL:0000234,1.40e-27,48;CL:0000839,6.30e-26,66;CL:0000557,1.81e-25,67;CL:0002194,3.71e-21,59;CL:0000576,3.71e-21,59;CL:0000040,3.71e-21,59;CL:0000559,3.71e-21,59;CL:0002009,2.49e-20,61;CL:0000763,5.31e-19,108;CL:0000049,5.31e-19,108;CL:0000623,1.94e-14,3;CL:0000825,1.94e-14,3;CL:0000226,3.94e-14,3;CL:0000842,3.94e-14,3;CL:0000134,5.71e-14,354;CL:0002320,1.58e-13,361;CL:0000875,1.66e-13,3;CL:0002396,1.66e-13,3;CL:0000838,5.18e-13,52;CL:0000542,1.04e-12,53;CL:0000051,1.04e-12,53;CL:0000219,5.76e-12,386;CL:0000771,1.93e-10,2;CL:0000048,4.69e-10,427;CL:0000723,8.60e-10,433;CL:0000034,1.88e-09,441;CL:0000097,5.25e-09,5;CL:0002028,5.25e-09,5;CL:0000791,7.58e-08,18;CL:0000789,7.58e-08,18;CL:0002420,7.58e-08,18;CL:0002419,7.58e-08,18;CL:0000790,7.58e-08,18;CL:0000236,2.26e-07,14
|ontology_enrichment_development_v019=CL:0002057;7.56e-21;42!CL:0000051;4.76e-08;53!CL:0000790;7.66e-08;18
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002390!3.74e-24!102;UBERON:0003061!3.74e-24!102;UBERON:0002193!1.28e-22!112;UBERON:0002371!3.90e-20!80;UBERON:0001474!7.07e-18!86;UBERON:0002405!8.67e-16!115;UBERON:0004765!2.55e-14!101;UBERON:0001434!2.55e-14!101;UBERON:0007023!3.49e-09!115;UBERON:0003081!6.05e-07!216
|ontology_enrichment_uberon=UBERON:0002390!3.74e-24!102;UBERON:0003061!3.74e-24!102;UBERON:0002193!1.28e-22!112;UBERON:0002371!3.90e-20!80;UBERON:0001474!7.07e-18!86;UBERON:0002405!8.67e-16!115;UBERON:0004765!2.55e-14!101;UBERON:0001434!2.55e-14!101;UBERON:0007023!3.49e-09!115;UBERON:0003081!6.05e-07!216
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.85e-23,98;UBERON:0003061,1.85e-23,98;UBERON:0002371,7.16e-22,76;UBERON:0002193,9.72e-21,108;UBERON:0001474,6.56e-20,82;UBERON:0004765,1.07e-17,90;UBERON:0002405,5.74e-17,93;UBERON:0001434,1.97e-15,100;UBERON:0002384,6.37e-13,371;UBERON:0003081,2.68e-08,203;UBERON:0002204,2.67e-07,167
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|short_description=p1@GRASPOS
|short_description=p1@GRASPOS
}}
}}

Latest revision as of 20:53, 18 September 2015

Short description:p1@GRASPOS
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_GRASPOS_5end
Coexpression cluster:C325_Mast_Eosinophils_CD14_immature_Basophils_granulocyte_Natural
Association with transcript: -45bp_to_BC028005_5end
EntrezGene:GRASPOS
HGNC: 32680
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data