FFCP PHASE1:Hg19::chr2:88991321..88991342,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:88991321..88991342,+
|short_description=p4@RPIA
|description=CAGE_peak_4_at_RPIA_5end
|association_with_transcript=117bp_to_BC015529_5end
|EntrezGene=2293...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22934 | |EntrezGene=22934 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10297 | |HGNC=10297 | ||
|TSSclassifier=strong | |||
|UniProt=P49247 | |UniProt=P49247 | ||
|association_with_transcript=117bp_to_BC015529_5end | |||
|cluster_id=chr2:88991321..88991342,+ | |||
|description=CAGE_peak_4_at_RPIA_5end | |||
|id=chr2:88991321..88991342,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.49e-09!53;CL:0000051!1.49e-09!53;CL:0000838!4.55e-09!52;CL:0000945!5.77e-08!24;CL:0000826!5.77e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.13e-11;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.52e-11,24;CL:0000826,5.52e-11,24;CL:0000542,1.17e-09,53;CL:0000051,1.17e-09,53;CL:0000838,5.61e-09,52;CL:0000037,9.43e-08,168;CL:0000988,1.98e-07,177;CL:0002032,2.63e-07,161;CL:0000837,2.63e-07,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!1.75e-23!51;DOID:0060083!1.75e-23!51;DOID:162!1.21e-18!235;DOID:1240!1.37e-18!39;DOID:14566!3.65e-18!239;DOID:0050686!2.57e-15!137;DOID:8692!2.10e-14!31;DOID:0060058!2.08e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:1240;3.53e-22;39!DOID:2531;2.08e-21;51!DOID:0060083;2.08e-21;51!DOID:8692;5.69e-20;31!DOID:0060058;2.58e-11;10!DOID:1036;9.79e-09;8 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.14e-36,51;DOID:0060083,2.14e-36,51;DOID:1240,1.63e-28,39;DOID:8692,2.11e-21,31;DOID:0050686,2.00e-16,137;DOID:162,2.90e-15,235;DOID:14566,2.24e-14,239;DOID:0060058,1.43e-11,10;DOID:1036,5.04e-09,8 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p4@RPIA | |||
}} | }} |
Latest revision as of 21:01, 18 September 2015
Short description: | p4@RPIA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RPIA_5end |
Coexpression cluster: | NA |
Association with transcript: | 117bp_to_BC015529_5end |
EntrezGene: | RPIA |
HGNC: | 10297 |
UniProt: | P49247 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.52e-11 | 24 |
pro-B cell | 5.52e-11 | 24 |
lymphocyte | 1.17e-09 | 53 |
common lymphoid progenitor | 1.17e-09 | 53 |
lymphoid lineage restricted progenitor cell | 5.61e-09 | 52 |
hematopoietic stem cell | 9.43e-08 | 168 |
hematopoietic cell | 1.98e-07 | 177 |
hematopoietic oligopotent progenitor cell | 2.63e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.63e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.14e-36 | 51 |
immune system cancer | 2.14e-36 | 51 |
leukemia | 1.63e-28 | 39 |
myeloid leukemia | 2.11e-21 | 31 |
organ system cancer | 2.00e-16 | 137 |
cancer | 2.90e-15 | 235 |
disease of cellular proliferation | 2.24e-14 | 239 |
lymphoma | 1.43e-11 | 10 |
chronic leukemia | 5.04e-09 | 8 |