FFCP PHASE1:Hg19::chr12:52448338..52448401,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=3164 | |EntrezGene=3164 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC=7980 | |HGNC=7980 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q53Y00,Q6IBU8 | |UniProt=Q53Y00,Q6IBU8 | ||
|association_with_transcript=225bp_to_AB307717,AB464647,AB590255,BT007144,CR456704,CU677577,DQ891134,DQ894313,HQ692855_5end | |association_with_transcript=225bp_to_AB307717,AB464647,AB590255,BT007144,CR456704,CU677577,DQ891134,DQ894313,HQ692855_5end | ||
|cluster_id=chr12:52448338..52448401,+ | |||
|coexpression_cluster_id=C1018 | |coexpression_cluster_id=C1018 | ||
|description=CAGE_peak_7_at_NR4A1_5end | |description=CAGE_peak_7_at_NR4A1_5end |
Latest revision as of 21:16, 18 September 2015
Short description: | p7@NR4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NR4A1_5end |
Coexpression cluster: | C1018_immature_CD14_Mast_cervical_seminal_heart_ovary |
Association with transcript: | 225bp_to_AB307717, AB464647, AB590255, BT007144, CR456704, CU677577, DQ891134, DQ894313, HQ692855_5end |
EntrezGene: | NR4A1 |
HGNC: | 7980 |
UniProt: | Q53Y00Q6IBU8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p7@NR4A1 |
---|
0
5
10
15
20
25
30
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.50e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.50e-12 | 42 |
granulocyte monocyte progenitor cell | 6.65e-12 | 67 |
myeloid leukocyte | 2.00e-11 | 72 |
defensive cell | 2.68e-11 | 48 |
phagocyte | 2.68e-11 | 48 |
myeloid lineage restricted progenitor cell | 6.07e-11 | 66 |
macrophage dendritic cell progenitor | 1.24e-08 | 61 |
monopoietic cell | 5.31e-08 | 59 |
monocyte | 5.31e-08 | 59 |
Showing 1 to 10 of 14 entries
Ontology term | p-value | n |
---|---|---|
adult organism | 1.55e-11 | 114 |
hematopoietic system | 9.06e-10 | 98 |
blood island | 9.06e-10 | 98 |
bone marrow | 1.02e-09 | 76 |
bone element | 1.66e-09 | 82 |
hemolymphoid system | 3.54e-08 | 108 |
skeletal system | 4.01e-08 | 100 |
skeletal element | 4.43e-08 | 90 |
immune system | 1.58e-07 | 93 |
Showing 1 to 9 of 9 entries