Personal tools

FFCP PHASE1:Hg19::chr12:52448338..52448401,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=supported
|DHSsupport=supported
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=3164
|EntrezGene=3164
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding
|HGNC=7980
|HGNC=7980
|TSSclassifier=not
|TSSclassifier=strong
|UniProt=Q53Y00,Q6IBU8
|UniProt=Q53Y00,Q6IBU8
|association_with_transcript=225bp_to_AB307717,AB464647,AB590255,BT007144,CR456704,CU677577,DQ891134,DQ894313,HQ692855_5end
|association_with_transcript=225bp_to_AB307717,AB464647,AB590255,BT007144,CR456704,CU677577,DQ891134,DQ894313,HQ692855_5end
|cluster_id=chr12:52448338..52448401,+
|coexpression_cluster_id=C1018
|coexpression_cluster_id=C1018
|description=CAGE_peak_7_at_NR4A1_5end
|description=CAGE_peak_7_at_NR4A1_5end

Latest revision as of 21:16, 18 September 2015

Short description:p7@NR4A1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_7_at_NR4A1_5end
Coexpression cluster:C1018_immature_CD14_Mast_cervical_seminal_heart_ovary
Association with transcript: 225bp_to_AB307717, AB464647, AB590255, BT007144, CR456704, CU677577, DQ891134, DQ894313, HQ692855_5end
EntrezGene:NR4A1
HGNC: 7980
UniProt: Q53Y00Q6IBU8
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
5
10
15
20
25
30




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data