FFCP PHASE1:Hg19::chr12:52448515..52448538,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3164 | |EntrezGene=3164 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7980 | |HGNC=7980 | ||
|TSSclassifier=strong | |||
|UniProt=Q53Y00,Q6IBU8 | |UniProt=Q53Y00,Q6IBU8 | ||
|association_with_transcript=402bp_to_AB307717,AB464647,AB590255,BT007144,CR456704,CU677577,DQ891134,DQ894313,HQ692855_5end | |association_with_transcript=402bp_to_AB307717,AB464647,AB590255,BT007144,CR456704,CU677577,DQ891134,DQ894313,HQ692855_5end | ||
|cluster_id=chr12:52448515..52448538,+ | |||
|coexpression_cluster_id=C1018 | |coexpression_cluster_id=C1018 | ||
|description=CAGE_peak_9_at_NR4A1_5end | |description=CAGE_peak_9_at_NR4A1_5end | ||
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|ontology_enrichment_celltype=CL:0002057!3.83e-11!42;CL:0000860!5.18e-11!45;CL:0000557!6.19e-09!71;CL:0000839!1.03e-07!70;CL:0000766!2.44e-07!76;CL:0002009!6.60e-07!65 | |ontology_enrichment_celltype=CL:0002057!3.83e-11!42;CL:0000860!5.18e-11!45;CL:0000557!6.19e-09!71;CL:0000839!1.03e-07!70;CL:0000766!2.44e-07!76;CL:0002009!6.60e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000097;9.68e-12;5 | |ontology_enrichment_celltype_v019=CL:0000097;9.68e-12;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,9.48e-12,5;CL:0002028,9.48e-12,5 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.20e-08;4!UBERON:0007284;2.20e-08;4!UBERON:0007297;1.48e-07;2!UBERON:0006965;4.23e-07;2 | |ontology_enrichment_development_v019=UBERON:0005062;2.20e-08;4!UBERON:0007284;2.20e-08;4!UBERON:0007297;1.48e-07;2!UBERON:0006965;4.23e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.06e-08!102;UBERON:0003061!5.06e-08!102;UBERON:0002371!7.39e-08!80;UBERON:0001474!1.05e-07!86;UBERON:0004765!1.12e-07!101;UBERON:0001434!1.12e-07!101;UBERON:0007023!1.74e-07!115;UBERON:0000926!9.87e-07!448;UBERON:0004120!9.87e-07!448;UBERON:0006603!9.87e-07!448 | |ontology_enrichment_uberon=UBERON:0002390!5.06e-08!102;UBERON:0003061!5.06e-08!102;UBERON:0002371!7.39e-08!80;UBERON:0001474!1.05e-07!86;UBERON:0004765!1.12e-07!101;UBERON:0001434!1.12e-07!101;UBERON:0007023!1.74e-07!115;UBERON:0000926!9.87e-07!448;UBERON:0004120!9.87e-07!448;UBERON:0006603!9.87e-07!448 | ||
|ontology_enrichment_uberon_v019=UBERON:0002133;7.12e-08;2!UBERON:0005090;1.48e-07;2!UBERON:0001630;1.48e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0002133;7.12e-08;2!UBERON:0005090;1.48e-07;2!UBERON:0001630;1.48e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.85e-11,114;UBERON:0002133,5.73e-08,2;UBERON:0005090,1.56e-07,2;UBERON:0001630,1.56e-07,2 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0.587200878669695,0,0.601633342410425,0.217010870715852,0,0,0,0.290796477559129,0.755751887377619,0.485168122375632,1.39457422143411,0,1.54853185447552,0.28769239232215,0.256160706529101,0.709446689665756,1.72372840368309,0,0,0.752969358170419,1.09162460023138,0.449446968890169,6.73384563215986,4.49300637906531,6.39337125799041,0,0,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0,0.868755378820466,0.605399502633369,0,0,1.05627643155971,1.06302149982522,0.419317291016752,0.112328631146495,0.600707571366025,0,0.855038231223746,0.39783335439818,0.547992461293902,0,0,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0.764546456250458,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,0,0,0,0,0,3.33146993609895,0,0,0,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0.438977620880838,0,1.05166641234618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0.168584690078102,0.482022059766964,0.110293972732394,0,0,0.808987848960987,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,2.46331618947972,0.088048434013226,10.3664057770386,4.61183850934277,7.82703087243556,0.063497894292169,2.67391897890794,0,0,0.719792448923265,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.553107505625109,0,0,0,0.413536052245775,0.647142602455851,1.06727557803444,0,1.66435439510497,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0.116210378459959,0.241718899183244,0,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,1.05650146756755,0,0,1.13008116620243,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,2.53329162357197,0.329294892959902,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0.37428108081644,0.73254089635947,0.121360521749513,0,0,0.71623345421307,0,0,0,0,0.333926115068718,0,0.211125408127993,1.19548792950642,1.10513566212459,0,0.20453736500431,0,0,0,0,0,2.56472854656027,0,0,0,0,0,0.260427761085233,0.0874599999961957,1.44999915086959,0.1137934482855,0,0.236387681767936,0,0,0.347249989866585,0,0,0,0,0,0.658156191461918,0.762569244632931,0.83654246567162,1.30815439456455,0.113942055847001,0,0.269272933229316,0.108647371922008,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,1.23840590304675,1.22206028986725,0.889563386041866,0.494255755786011,0,0.337005664903385,3.21031058919516,0,0,0.782658475728359,0,0.394584402849391,0,0,0.126373159256976,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0.391969589657511,0,1.57254001417827,0,0.0967563312890851,0.0730893170861856,0,0.775912131907355,0,0,0.137041924646751,0,0,0.782205530939212,0,4.26905989478705,0,0,0,0.171594997861965,0,0.124252535565433,0.942776138467182,0,0,0,0,0,0,0,0,1.05154941711726,3.35138881526705,0.916641696046735,2.87149209830726,0.599037001496973,0.858452096273142,0.446342914883745,0.604651252380536,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,3.0952078182318,0,0,0.157611414598396,0.0524545881349981,0.105600336519406,3.40645944732405,0,0,1.32418394073086,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.171086837884329,0,2.24253566392159,2.04365596629566,7.04206394090232,0,0.197611631897944,0,0,0.544017803369474,0.5013797880454,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0.758245587708239,5.13837600380941,0,0,0.144921028610825,0,0,0,0.757612021100357,0,0,0.228840068396924,0.302461847526478,0.310874401165561,0,0,0,0,0.829412415681711,0,0,0,0,0,0.363697318405119,0.214821114084977,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.19998739585493,0,0,0,0.368211900503681,0,0,0.127894371303652,0,0,0,0,0,1.23935764259002,0,0.318004350653419,0,0,3.17408349321616,0,0.0642292250964595,0,0.159633859057151,0.41023272848151,0,0.138314504928436,0,0,0.0981477185010256,0.235939446695481,0,0.924205329202706,0,0,0.397832444232549,8.2731361184183,0,0,0,0.163771917510097,0.147856086217045,0.202612753855184,0,0,0,0.546974809018219,0,2.48105589194647,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,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| ||
|short_description=p9@NR4A1 | |short_description=p9@NR4A1 | ||
}} | }} |
Latest revision as of 21:19, 18 September 2015
Short description: | p9@NR4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_NR4A1_5end |
Coexpression cluster: | C1018_immature_CD14_Mast_cervical_seminal_heart_ovary |
Association with transcript: | 402bp_to_AB307717, AB464647, AB590255, BT007144, CR456704, CU677577, DQ891134, DQ894313, HQ692855_5end |
EntrezGene: | NR4A1 |
HGNC: | 7980 |
UniProt: | Q53Y00Q6IBU8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 9.48e-12 | 5 |
basophil mast progenitor cell | 9.48e-12 | 5 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.85e-11 | 114 |
atrioventricular valve | 5.73e-08 | 2 |
muscle structure | 1.56e-07 | 2 |
muscle organ | 1.56e-07 | 2 |