FFCP PHASE1:Hg19::chr14:106331769..106331787,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=5518 | |HGNC=5518 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000439842_5end | |association_with_transcript=0bp_to_ENST00000439842_5end | ||
|cluster_id=chr14:106331769..106331787,- | |||
|coexpression_cluster_id=C904 | |||
|description=CAGE_peak_1_at_IGHD7-27_5end | |description=CAGE_peak_1_at_IGHD7-27_5end | ||
|id=chr14:106331769..106331787,- | |id=chr14:106331769..106331787,- | ||
|ontology_enrichment_celltype=CL:0000784!1.54e-18!3;CL:0000767!3.95e-17!3;CL:0000037!7.92e-10!172;CL:0000566!7.92e-10!172;CL:0000988!4.75e-09!182;CL:0000842!5.61e-08!3;CL:0001024!2.66e-07!1 | |ontology_enrichment_celltype=CL:0000784!1.54e-18!3;CL:0000767!3.95e-17!3;CL:0000037!7.92e-10!172;CL:0000566!7.92e-10!172;CL:0000988!4.75e-09!182;CL:0000842!5.61e-08!3;CL:0001024!2.66e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000784;7.10e-41;3!CL:0000037;8.17e-15;1!CL:0001024;8.17e-15;1!CL:0002032;2.57e-14;1!CL:0000557;2.57e-14;1!CL:0000451;1.21e-11;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,7.60e-41,3;CL:0001024,8.17e-15,1;CL:0000451,1.23e-11,10;CL:0000037,9.83e-07,168 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:8692;1.02e-10;31!DOID:1240;6.59e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,9.95e-11,31;DOID:1240,1.63e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002370!1.41e-12!4;UBERON:0005058!1.41e-12!4;UBERON:0009113!1.41e-12!4;UBERON:0003295!1.41e-12!4;UBERON:0005562!1.41e-12!4;UBERON:0004177!1.65e-12!7;UBERON:0001042!9.00e-09!10;UBERON:0009145!9.00e-09!10;UBERON:0003351!1.49e-08!6;UBERON:0006562!5.51e-08!11;UBERON:0000029!6.02e-07!1;UBERON:0002372!8.49e-07!1;UBERON:0001961!8.49e-07!1;UBERON:0001744!8.49e-07!1;UBERON:0001735!8.49e-07!1;UBERON:0002193!9.74e-07!112 | |ontology_enrichment_uberon=UBERON:0002370!1.41e-12!4;UBERON:0005058!1.41e-12!4;UBERON:0009113!1.41e-12!4;UBERON:0003295!1.41e-12!4;UBERON:0005562!1.41e-12!4;UBERON:0004177!1.65e-12!7;UBERON:0001042!9.00e-09!10;UBERON:0009145!9.00e-09!10;UBERON:0003351!1.49e-08!6;UBERON:0006562!5.51e-08!11;UBERON:0000029!6.02e-07!1;UBERON:0002372!8.49e-07!1;UBERON:0001961!8.49e-07!1;UBERON:0001744!8.49e-07!1;UBERON:0001735!8.49e-07!1;UBERON:0002193!9.74e-07!112 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p1@IGHD7-27 | |short_description=p1@IGHD7-27 | ||
}} | }} |
Latest revision as of 21:24, 18 September 2015
Short description: | p1@IGHD7-27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGHD7-27_5end |
Coexpression cluster: | C904_acute_CD133_CD34_Dendritic_carcinoid_granulocyte_spleen |
Association with transcript: | 0bp_to_ENST00000439842_5end |
EntrezGene: | NA |
HGNC: | 5518 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 7.60e-41 | 3 |
CD34-positive, CD38-negative hematopoietic stem cell | 8.17e-15 | 1 |
dendritic cell | 1.23e-11 | 10 |
hematopoietic stem cell | 9.83e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 9.95e-11 | 31 |
leukemia | 1.63e-08 | 39 |