FFCP PHASE1:Hg19::chr1:178310639..178310679,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:178310639..178310679,+
|short_description=p9@RASAL2
|description=CAGE_peak_9_at_RASAL2_5end
|association_with_transcript=33bp_to_ENST00000462775,NM_004841,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9462 | |EntrezGene=9462 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9874 | |HGNC=9874 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJF2,A8K2P3 | |UniProt=Q9UJF2,A8K2P3 | ||
|association_with_transcript=33bp_to_ENST00000462775,NM_004841,uc001glr.2_5end | |||
|cluster_id=chr1:178310639..178310679,+ | |||
|description=CAGE_peak_9_at_RASAL2_5end | |||
|id=chr1:178310639..178310679,+ | |||
|ontology_enrichment_celltype=CL:0000221!9.81e-09!71 | |||
|ontology_enrichment_celltype_v019=CL:0002605;3.92e-14;3!CL:0000128;2.52e-10;7!CL:0000126;2.52e-10;7!CL:0000127;2.52e-10;7!CL:0002537;3.96e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.10e-14,3;CL:0000128,2.37e-10,7;CL:0000126,2.37e-10,7;CL:0000127,2.37e-10,7;CL:0002453,2.37e-10,7;CL:0002537,4.25e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0005062;4.07e-10;4!UBERON:0007284;4.07e-10;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;1.78e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.35e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0003103!2.81e-08!69;UBERON:0000161!3.50e-08!35;UBERON:0000467!3.93e-08!625;UBERON:0000480!4.82e-08!626;UBERON:0001004!8.94e-08!72;UBERON:0000468!9.82e-08!659;UBERON:0000062!1.70e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0006562;2.66e-10;2!UBERON:0000002;2.09e-07;6!UBERON:0001560;2.09e-07;6!UBERON:0000974;2.57e-07;6!UBERON:0001723;2.58e-07;3!UBERON:0001033;2.58e-07;3!UBERON:0010313;6.13e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006562,3.22e-10,11;UBERON:0001042,1.85e-07,10;UBERON:0009145,1.85e-07,10;UBERON:0000002,2.24e-07,6;UBERON:0001560,2.24e-07,6;UBERON:0001723,2.67e-07,3;UBERON:0001033,2.67e-07,3;UBERON:0010056,2.67e-07,3;UBERON:0004121,4.18e-07,171;UBERON:0000924,4.18e-07,171;UBERON:0006601,4.18e-07,171;UBERON:0005795,7.75e-07,22;UBERON:0000166,8.28e-07,22;UBERON:0010313,8.90e-07,10;UBERON:0002342,8.90e-07,10;UBERON:0005062,8.90e-07,10 | |||
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| ||
|short_description=p9@RASAL2 | |||
}} | }} |
Latest revision as of 21:28, 18 September 2015
Short description: | p9@RASAL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RASAL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 33bp_to_ENST00000462775, NM_004841, uc001glr.2_5end |
EntrezGene: | RASAL2 |
HGNC: | 9874 |
UniProt: | Q9UJF2A8K2P3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.10e-14 | 3 |
oligodendrocyte | 2.37e-10 | 7 |
macroglial cell | 2.37e-10 | 7 |
astrocyte | 2.37e-10 | 7 |
oligodendrocyte precursor cell | 2.37e-10 | 7 |
amnion mesenchymal stem cell | 4.25e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
pharynx | 3.22e-10 | 11 |
chordate pharynx | 1.85e-07 | 10 |
pharyngeal region of foregut | 1.85e-07 | 10 |
uterine cervix | 2.24e-07 | 6 |
neck of organ | 2.24e-07 | 6 |
tongue | 2.67e-07 | 3 |
gustatory system | 2.67e-07 | 3 |
future tongue | 2.67e-07 | 3 |
ectoderm-derived structure | 4.18e-07 | 171 |
ectoderm | 4.18e-07 | 171 |
presumptive ectoderm | 4.18e-07 | 171 |
embryonic uterus | 7.75e-07 | 22 |
oral opening | 8.28e-07 | 22 |
neural crest-derived structure | 8.90e-07 | 10 |
neural crest | 8.90e-07 | 10 |
neural fold | 8.90e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.35e-10 | 14 |