FFCP PHASE1:Hg19::chr2:89160425..89160447,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=5722 | |HGNC=5722 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000390239_5end | |association_with_transcript=0bp_to_ENST00000390239_5end | ||
|cluster_id=chr2:89160425..89160447,- | |||
|coexpression_cluster_id=C1508 | |||
|description=CAGE_peak_1_at_IGKJ4_5end | |description=CAGE_peak_1_at_IGKJ4_5end | ||
|id=chr2:89160425..89160447,- | |id=chr2:89160425..89160447,- | ||
|ontology_enrichment_celltype=CL:0000236!2.69e-33!14;CL:0000945!7.59e-31!24;CL:0000826!7.59e-31!24;CL:0000838!1.09e-20!52;CL:0000542!3.50e-20!53;CL:0000051!3.50e-20!53;CL:0000738!7.68e-12!140;CL:0000784!4.30e-10!3;CL:0002087!6.98e-10!119;CL:0000037!6.30e-09!172;CL:0000566!6.30e-09!172;CL:0000842!1.31e-08!3;CL:0000767!1.41e-08!3;CL:0000988!5.25e-08!182;CL:0000785!6.86e-07!2;CL:0000955!6.86e-07!2;CL:0000818!6.86e-07!2;CL:0000954!6.86e-07!2;CL:0000816!6.86e-07!2;CL:0002031!8.47e-07!124 | |ontology_enrichment_celltype=CL:0000236!2.69e-33!14;CL:0000945!7.59e-31!24;CL:0000826!7.59e-31!24;CL:0000838!1.09e-20!52;CL:0000542!3.50e-20!53;CL:0000051!3.50e-20!53;CL:0000738!7.68e-12!140;CL:0000784!4.30e-10!3;CL:0002087!6.98e-10!119;CL:0000037!6.30e-09!172;CL:0000566!6.30e-09!172;CL:0000842!1.31e-08!3;CL:0000767!1.41e-08!3;CL:0000988!5.25e-08!182;CL:0000785!6.86e-07!2;CL:0000955!6.86e-07!2;CL:0000818!6.86e-07!2;CL:0000954!6.86e-07!2;CL:0000816!6.86e-07!2;CL:0002031!8.47e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000236;2.89e-70;13!CL:0000945;1.12e-50;24!CL:0000784;2.37e-21;3!CL:0000542;2.44e-21;53!CL:0000785;6.10e-08;1!CL:0000819;6.10e-08;1!CL:0000946;1.11e-07;1!CL:0000786;1.11e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.97e-76,14;CL:0000945,1.15e-50,24;CL:0000826,1.15e-50,24;CL:0000838,3.82e-29,52;CL:0000542,1.56e-28,53;CL:0000051,1.56e-28,53;CL:0000784,2.37e-21,3;CL:0000785,6.20e-14,2;CL:0000955,6.20e-14,2;CL:0000818,6.20e-14,2;CL:0000954,6.20e-14,2;CL:0000816,6.20e-14,2;CL:0000738,1.34e-13,136;CL:0002087,5.67e-13,115;CL:0002031,2.70e-12,120;CL:0000037,2.71e-10,168;CL:0000817,1.38e-09,3;CL:0000988,1.41e-09,177;CL:0002032,2.55e-08,161;CL:0000837,2.55e-08,161;CL:0000819,6.10e-08,1;CL:0000946,1.11e-07,1;CL:0000786,1.11e-07,1;CL:0000980,1.11e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;2.44e-21;53!CL:0000954;6.20e-14;2!UBERON:0004872;1.57e-08;7!UBERON:0001045;1.11e-07;1!UBERON:0006298;1.59e-07;1 | |||
|ontology_enrichment_disease=DOID:0060058!1.43e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:0060073;6.10e-08;1!DOID:8675;6.10e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,6.10e-08,1;DOID:8675,6.10e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.44e-13!115;UBERON:0000178!4.75e-13!15;UBERON:0000179!4.75e-13!15;UBERON:0000463!4.75e-13!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;3.24e-09;3!UBERON:0002372;1.11e-07;1!UBERON:0001154;1.11e-07;1!UBERON:0001153;1.11e-07;1!UBERON:0009854;1.11e-07;1!UBERON:0001961;1.11e-07;1!UBERON:0001744;1.11e-07;1!UBERON:0001042;1.11e-07;1!UBERON:0001735;1.11e-07;1!UBERON:0000029;1.59e-07;1!UBERON:0001736;1.59e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.67e-09,3;UBERON:0004854,3.67e-09,3;UBERON:0009034,3.67e-09,3;UBERON:0002095,3.67e-09,3;UBERON:0004782,3.67e-09,3;UBERON:0003281,3.67e-09,3;UBERON:0009664,3.67e-09,3;UBERON:0002296,3.67e-09,3;UBERON:0005602,3.67e-09,3;UBERON:0001179,3.67e-09,3;UBERON:0006293,3.67e-09,3;UBERON:0002372,1.04e-07,1;UBERON:0001961,1.04e-07,1;UBERON:0001744,1.04e-07,1;UBERON:0001735,1.04e-07,1;UBERON:0001154,1.18e-07,1;UBERON:0001153,1.18e-07,1;UBERON:0001045,1.18e-07,1;UBERON:0000029,1.26e-07,1;UBERON:0001736,1.64e-07,1;UBERON:0006298,1.64e-07,1 | |||
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| ||
|short_description=p1@IGKJ4 | |short_description=p1@IGKJ4 | ||
}} | }} |
Latest revision as of 21:29, 18 September 2015
Short description: | p1@IGKJ4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGKJ4_5end |
Coexpression cluster: | C1508_Dendritic_adult_lymphangiectasia_hairy_CD19_lymphoma_diffuse |
Association with transcript: | 0bp_to_ENST00000390239_5end |
EntrezGene: | NA |
HGNC: | 5722 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.97e-76 | 14 |
lymphocyte of B lineage | 1.15e-50 | 24 |
pro-B cell | 1.15e-50 | 24 |
lymphoid lineage restricted progenitor cell | 3.82e-29 | 52 |
lymphocyte | 1.56e-28 | 53 |
common lymphoid progenitor | 1.56e-28 | 53 |
plasmacytoid dendritic cell | 2.37e-21 | 3 |
mature B cell | 6.20e-14 | 2 |
pre-B-II cell | 6.20e-14 | 2 |
transitional stage B cell | 6.20e-14 | 2 |
small pre-B-II cell | 6.20e-14 | 2 |
immature B cell | 6.20e-14 | 2 |
leukocyte | 1.34e-13 | 136 |
nongranular leukocyte | 5.67e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 2.70e-12 | 120 |
hematopoietic stem cell | 2.71e-10 | 168 |
precursor B cell | 1.38e-09 | 3 |
hematopoietic cell | 1.41e-09 | 177 |
hematopoietic oligopotent progenitor cell | 2.55e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.55e-08 | 161 |
B-1 B cell | 6.10e-08 | 1 |
antibody secreting cell | 1.11e-07 | 1 |
plasma cell | 1.11e-07 | 1 |
plasmablast | 1.11e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.67e-09 | 3 |
gastrointestinal system mesentery | 3.67e-09 | 3 |
stomach region | 3.67e-09 | 3 |
mesentery | 3.67e-09 | 3 |
gastrointestinal system serosa | 3.67e-09 | 3 |
mesentery of stomach | 3.67e-09 | 3 |
gut mesentery | 3.67e-09 | 3 |
dorsal mesentery | 3.67e-09 | 3 |
dorsal mesogastrium | 3.67e-09 | 3 |
peritoneal cavity | 3.67e-09 | 3 |
spleen primordium | 3.67e-09 | 3 |
tonsil | 1.04e-07 | 1 |
mucosa-associated lymphoid tissue | 1.04e-07 | 1 |
lymphoid tissue | 1.04e-07 | 1 |
tonsillar ring | 1.04e-07 | 1 |
vermiform appendix | 1.18e-07 | 1 |
caecum | 1.18e-07 | 1 |
midgut | 1.18e-07 | 1 |
lymph node | 1.26e-07 | 1 |
submandibular gland | 1.64e-07 | 1 |
submandibular gland primordium | 1.64e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 6.10e-08 | 1 |
lymphosarcoma | 6.10e-08 | 1 |