FFCP PHASE1:Hg19::chrX:105066342..105066377,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:105066342..105066377,+ to FFCP PHASE1:Hg19::chrX:105066342..105066377,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=203447 | |EntrezGene=203447 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25391 | |HGNC=25391 | ||
|TSSclassifier=strong | |||
|UniProt=F5H049,Q7Z2Y5 | |UniProt=F5H049,Q7Z2Y5 | ||
|association_with_transcript=-158bp_to_ENST00000243300,ENST00000428173,NM_198465,uc004emd.2,uc010npc.1_5end | |||
|cluster_id=chrX:105066342..105066377,+ | |||
|coexpression_cluster_id=C1194 | |||
|description=CAGE_peak_5_at_NRK_5end | |||
|id=chrX:105066342..105066377,+ | |||
|ontology_enrichment_celltype=CL:0000188!1.64e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000188;2.36e-08;9!CL:0002600;2.74e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,2.74e-08,9;CL:0002600,2.98e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.89e-08;10!UBERON:0005564;4.89e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!9.47e-13!69;UBERON:0000481!7.66e-11!347;UBERON:0007100!5.27e-09!27;UBERON:0003135!2.93e-08!11;UBERON:0001048!3.46e-08!168;UBERON:0003104!1.03e-07!238;UBERON:0009142!1.03e-07!238;UBERON:0000119!3.68e-07!312;UBERON:0000948!3.99e-07!24;UBERON:0005498!3.99e-07!24;UBERON:0004140!3.99e-07!24;UBERON:0009881!3.99e-07!24;UBERON:0004141!3.99e-07!24;UBERON:0003084!3.99e-07!24;UBERON:0007005!3.99e-07!24;UBERON:0004139!3.99e-07!24;UBERON:0004291!3.99e-07!24;UBERON:0000483!8.21e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.65e-11;49!UBERON:0003135;5.32e-10;11!UBERON:0001134;5.76e-09;16!UBERON:0002036;5.76e-09;16!UBERON:0000948;6.48e-08;22!UBERON:0007100;8.26e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,5.13e-10,11;UBERON:0000948,4.75e-07,24;UBERON:0005498,4.75e-07,24;UBERON:0004140,4.75e-07,24;UBERON:0009881,4.75e-07,24;UBERON:0004141,4.75e-07,24;UBERON:0003084,4.75e-07,24;UBERON:0007005,4.75e-07,24;UBERON:0004139,4.75e-07,24;UBERON:0004291,4.75e-07,24;UBERON:0003103,5.61e-07,68 | |||
|phase1_expression=0.54503513781167,0,0,2.00146596706261,0,0.872338524100369,0,0,0,0.491467873003018,0,0,0,0.495065411840187,0.994192127183747,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.02290049474824,0,0,0,0,0,0.189069634328136,0.221729397462564,0.351339142772504,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0,1.12135520028461,0,0.24666754841716,1.24484414159907,0.404132016209064,0.817309515567294,0,0,0.234321431833797,0,0,0,0.352303495931295,0,0.140450806702248,0,0.491337269247072,0,0,0,0,0,0.505008341862199,0.750711119231785,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0.532844358032199,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.167516265334349,1.27587750330633,0,0,0,0.736148950314839,1.50051156317903,1.35632511849868,0,0.535286966391485,0.630809660135739,0.117141414992713,0.601892199455438,0,0,0,0.184369168541703,0,0,0.686286847621712,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308061348417659,0,0,0.527758144464379,0,0,0.647747748306418,0,0.812839312631559,0.501689773854853,0.254876273045038,0,0,0,0,0,0.656029291399411,0,1.854738209659,0,0,0,0,0,0.580024309752732,2.00263202249038,0.921022048356777,1.10269257987624,1.07420244868274,0.870100163485371,1.53407929348982,1.60257664164127,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0.632758849437452,0.190630193923825,0,3.42351190427136,0,0,0.359744915166629,0.823611089208164,0.471249609382746,0,0,0,1.95053495635836,0,0,0,0.282810863907425,0,0,0,0,1.15755106853338,2.62357900818653,0,0,0,0.286822704408103,0,0,0,0,0,0.379473173765715,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0,0,0.23874448473769,1.18785872333055,0.307160702099232,0,0,0,0,0,0.796991953004279,1.10513566212459,0,0,0,0.311039587661807,0,0,0,0.493217028184668,0,0,0,0,0,0,2.27395999990109,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0.591095237907095,0,0,0,0.615602068030377,0,0.46112780877612,0,0,0.957003479195758,0.915975934018623,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,32.1031058919516,0,0,0,0,1.57833761139756,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84398670132466,0,0,0,0,0.678923115418936,0,1.12990370390266,0,0,0.0633107959558787,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,3.0721064139948,2.06244381610515,0.717873024576814,0.199679000498991,0.858452096273142,0.446342914883745,4.0981918216903,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.788057072991982,1.15400093896996,11.4048363440959,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,2.82967749179399,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63718706865481,0.899606224327209,0.310525913752519,0,0,0,0.300515217994437,0.380805212168795,1.62748293281865,0,0,0,0,0,0,0,0,0,1.50109113962448,0,0,0.231522474323834,0.244736704506468,0,1.23520578864389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1088628642304,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,3.37069006618028,0,0,0,0,0,0,5.10205103528341,0,0,8.21842848458546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,28.995360783455,4.85710993059139,0,0,0,0,0,0,0,2.18559560503957,0,0.735444965261716,0,0,0,0.8453114551668,0,0,0.193373663920732,0,0,0,0,9.49437304720472,2.2936464170227,0,0,0,0,1.0580536810308,0,0,0,0,0.437062287854782,0,1.1218771271618,0,3.12442658418473,0.250707539292375,1.21245917149183,3.48353369203032,0,0,0,19.9974122429542,0.0645889098360061,0.558672428662721,2.80329656451534,0.12729431655633,3.43599221228973,1.08858373948481,10.2669990325584,0.134704106029175,0.143444410785353,13.3064142618405,0,0,3.8614456457388,0,2.34640942403454,1.833621662743,2.84827324821017,0,0.603821380773079,0 | |phase1_expression=0.54503513781167,0,0,2.00146596706261,0,0.872338524100369,0,0,0,0.491467873003018,0,0,0,0.495065411840187,0.994192127183747,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.02290049474824,0,0,0,0,0,0.189069634328136,0.221729397462564,0.351339142772504,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0,1.12135520028461,0,0.24666754841716,1.24484414159907,0.404132016209064,0.817309515567294,0,0,0.234321431833797,0,0,0,0.352303495931295,0,0.140450806702248,0,0.491337269247072,0,0,0,0,0,0.505008341862199,0.750711119231785,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0.532844358032199,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.167516265334349,1.27587750330633,0,0,0,0.736148950314839,1.50051156317903,1.35632511849868,0,0.535286966391485,0.630809660135739,0.117141414992713,0.601892199455438,0,0,0,0.184369168541703,0,0,0.686286847621712,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308061348417659,0,0,0.527758144464379,0,0,0.647747748306418,0,0.812839312631559,0.501689773854853,0.254876273045038,0,0,0,0,0,0.656029291399411,0,1.854738209659,0,0,0,0,0,0.580024309752732,2.00263202249038,0.921022048356777,1.10269257987624,1.07420244868274,0.870100163485371,1.53407929348982,1.60257664164127,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0.632758849437452,0.190630193923825,0,3.42351190427136,0,0,0.359744915166629,0.823611089208164,0.471249609382746,0,0,0,1.95053495635836,0,0,0,0.282810863907425,0,0,0,0,1.15755106853338,2.62357900818653,0,0,0,0.286822704408103,0,0,0,0,0,0.379473173765715,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0,0,0.23874448473769,1.18785872333055,0.307160702099232,0,0,0,0,0,0.796991953004279,1.10513566212459,0,0,0,0.311039587661807,0,0,0,0.493217028184668,0,0,0,0,0,0,2.27395999990109,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0.591095237907095,0,0,0,0.615602068030377,0,0.46112780877612,0,0,0.957003479195758,0.915975934018623,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,32.1031058919516,0,0,0,0,1.57833761139756,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84398670132466,0,0,0,0,0.678923115418936,0,1.12990370390266,0,0,0.0633107959558787,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,3.0721064139948,2.06244381610515,0.717873024576814,0.199679000498991,0.858452096273142,0.446342914883745,4.0981918216903,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.788057072991982,1.15400093896996,11.4048363440959,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,2.82967749179399,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63718706865481,0.899606224327209,0.310525913752519,0,0,0,0.300515217994437,0.380805212168795,1.62748293281865,0,0,0,0,0,0,0,0,0,1.50109113962448,0,0,0.231522474323834,0.244736704506468,0,1.23520578864389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1088628642304,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,3.37069006618028,0,0,0,0,0,0,5.10205103528341,0,0,8.21842848458546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,28.995360783455,4.85710993059139,0,0,0,0,0,0,0,2.18559560503957,0,0.735444965261716,0,0,0,0.8453114551668,0,0,0.193373663920732,0,0,0,0,9.49437304720472,2.2936464170227,0,0,0,0,1.0580536810308,0,0,0,0,0.437062287854782,0,1.1218771271618,0,3.12442658418473,0.250707539292375,1.21245917149183,3.48353369203032,0,0,0,19.9974122429542,0.0645889098360061,0.558672428662721,2.80329656451534,0.12729431655633,3.43599221228973,1.08858373948481,10.2669990325584,0.134704106029175,0.143444410785353,13.3064142618405,0,0,3.8614456457388,0,2.34640942403454,1.833621662743,2.84827324821017,0,0.603821380773079,0 | ||
|short_description=p5@NRK | |||
}} | }} |
Latest revision as of 21:39, 18 September 2015
Short description: | p5@NRK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NRK_5end |
Coexpression cluster: | C1194_skeletal_large_diaphragm_throat_trachea_testicular_tongue |
Association with transcript: | -158bp_to_ENST00000243300, ENST00000428173, NM_198465, uc004emd.2, uc010npc.1_5end |
EntrezGene: | NRK |
HGNC: | 25391 |
UniProt: | F5H049Q7Z2Y5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 2.74e-08 | 9 |
smooth muscle cell of trachea | 2.98e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 5.13e-10 | 11 |
heart | 4.75e-07 | 24 |
primitive heart tube | 4.75e-07 | 24 |
primary heart field | 4.75e-07 | 24 |
anterior lateral plate mesoderm | 4.75e-07 | 24 |
heart tube | 4.75e-07 | 24 |
heart primordium | 4.75e-07 | 24 |
cardiac mesoderm | 4.75e-07 | 24 |
cardiogenic plate | 4.75e-07 | 24 |
heart rudiment | 4.75e-07 | 24 |
compound organ | 5.61e-07 | 68 |