FFCP PHASE1:Hg19::chr6:43266027..43266061,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10864 | |EntrezGene=10864 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10971 | |HGNC=10971 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y694 | |UniProt=Q9Y694 | ||
|association_with_transcript=25bp_to_ENST00000372585,ENST00000372589_5end | |association_with_transcript=25bp_to_ENST00000372585,ENST00000372589_5end | ||
|cluster_id=chr6:43266027..43266061,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_SLC22A7_5end | |description=CAGE_peak_1_at_SLC22A7_5end | ||
|id=chr6:43266027..43266061,+ | |id=chr6:43266027..43266061,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.30e-40!12;CL:0000417!1.30e-40!12;CL:0000668!1.30e-40!12;CL:0000414!1.30e-40!12;CL:0000412!1.30e-40!12;CL:0000182!1.30e-40!12;CL:0000223!2.06e-07!59;CL:0002322!5.15e-07!5 | |ontology_enrichment_celltype=CL:0000181!1.30e-40!12;CL:0000417!1.30e-40!12;CL:0000668!1.30e-40!12;CL:0000414!1.30e-40!12;CL:0000412!1.30e-40!12;CL:0000182!1.30e-40!12;CL:0000223!2.06e-07!59;CL:0002322!5.15e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.31e-53;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.31e-53,12;CL:0000223,1.10e-10,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.71e-42;11!UBERON:0009497;6.03e-36;13!UBERON:0003104;1.56e-26;31!UBERON:0001041;1.76e-15;30!CL:0000223;1.93e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.30e-39!19;UBERON:0006925!1.30e-39!19;UBERON:0008836!1.30e-39!19;UBERON:0005057!2.17e-34!26;UBERON:0008835!5.32e-34!22;UBERON:0003894!5.32e-34!22;UBERON:0009854!1.87e-32!23;UBERON:0007499!9.85e-30!25;UBERON:0009497!9.85e-30!25;UBERON:0000015!9.85e-30!25;UBERON:0002423!9.85e-30!25;UBERON:0006235!9.85e-30!25;UBERON:0004161!9.85e-30!25;UBERON:0009856!1.57e-28!26;UBERON:0005172!3.86e-25!55;UBERON:0005173!3.86e-25!55;UBERON:0002365!1.13e-23!31;UBERON:0002330!1.13e-23!31;UBERON:0002417!2.04e-22!61;UBERON:0000916!2.04e-22!61;UBERON:0002368!8.76e-21!35;UBERON:0000949!8.32e-16!45;UBERON:0003929!6.70e-13!54;UBERON:0005177!1.12e-11!107;UBERON:0002530!1.14e-11!59;UBERON:0009569!6.37e-11!113;UBERON:0001301!5.75e-09!1;UBERON:0005911!6.13e-08!82;UBERON:0001041!9.36e-08!98;UBERON:0003914!2.19e-07!118;UBERON:0000466!8.83e-07!126 | |ontology_enrichment_uberon=UBERON:0002107!1.30e-39!19;UBERON:0006925!1.30e-39!19;UBERON:0008836!1.30e-39!19;UBERON:0005057!2.17e-34!26;UBERON:0008835!5.32e-34!22;UBERON:0003894!5.32e-34!22;UBERON:0009854!1.87e-32!23;UBERON:0007499!9.85e-30!25;UBERON:0009497!9.85e-30!25;UBERON:0000015!9.85e-30!25;UBERON:0002423!9.85e-30!25;UBERON:0006235!9.85e-30!25;UBERON:0004161!9.85e-30!25;UBERON:0009856!1.57e-28!26;UBERON:0005172!3.86e-25!55;UBERON:0005173!3.86e-25!55;UBERON:0002365!1.13e-23!31;UBERON:0002330!1.13e-23!31;UBERON:0002417!2.04e-22!61;UBERON:0000916!2.04e-22!61;UBERON:0002368!8.76e-21!35;UBERON:0000949!8.32e-16!45;UBERON:0003929!6.70e-13!54;UBERON:0005177!1.12e-11!107;UBERON:0002530!1.14e-11!59;UBERON:0009569!6.37e-11!113;UBERON:0001301!5.75e-09!1;UBERON:0005911!6.13e-08!82;UBERON:0001041!9.36e-08!98;UBERON:0003914!2.19e-07!118;UBERON:0000466!8.83e-07!126 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.18e-55;19!UBERON:0006925;2.18e-55;19!UBERON:0002423;6.28e-42;25!UBERON:0002365;1.19e-32;31!UBERON:0002330;1.19e-32;31!UBERON:0002368;1.25e-28;33!UBERON:0000949;1.67e-20;43!UBERON:0005172;5.33e-19;52!UBERON:0005173;5.33e-19;52!UBERON:0002417;1.23e-15;58!UBERON:0000916;1.23e-15;58!UBERON:0002530;3.06e-10;57!UBERON:0001007;6.60e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.18e-55,19;UBERON:0006925,2.18e-55,19;UBERON:0008836,2.18e-55,19;UBERON:0008835,9.64e-48,22;UBERON:0003894,9.64e-48,22;UBERON:0009854,1.23e-45,23;UBERON:0007499,6.28e-42,25;UBERON:0009497,6.28e-42,25;UBERON:0000015,6.28e-42,25;UBERON:0002423,6.28e-42,25;UBERON:0006235,6.28e-42,25;UBERON:0004161,6.28e-42,25;UBERON:0009856,2.74e-40,26;UBERON:0002365,1.14e-33,31;UBERON:0002330,1.14e-33,31;UBERON:0002368,9.87e-30,35;UBERON:0005172,2.29e-28,54;UBERON:0005173,2.29e-28,54;UBERON:0002417,2.03e-25,60;UBERON:0000916,2.03e-25,60;UBERON:0000949,6.07e-23,45;UBERON:0003929,5.63e-19,54;UBERON:0002530,2.72e-17,59;UBERON:0005177,1.30e-14,101;UBERON:0009569,4.71e-13,112;UBERON:0005911,3.51e-12,82;UBERON:0001041,2.00e-11,87;UBERON:0003104,9.69e-09,160;UBERON:0009142,9.69e-09,160;UBERON:0003914,3.07e-08,117;UBERON:0004921,4.39e-08,118;UBERON:0005256,7.36e-08,122;UBERON:0002100,9.37e-07,199 | |||
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|short_description=p1@SLC22A7 | |short_description=p1@SLC22A7 | ||
}} | }} |
Latest revision as of 21:54, 18 September 2015
Short description: | p1@SLC22A7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC22A7_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 25bp_to_ENST00000372585, ENST00000372589_5end |
EntrezGene: | SLC22A7 |
HGNC: | 10971 |
UniProt: | Q9Y694 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.31e-53 | 12 |
endodermal cell | 1.10e-10 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 2.18e-55 | 19 |
digestive gland | 2.18e-55 | 19 |
liver bud | 2.18e-55 | 19 |
hepatic diverticulum | 9.64e-48 | 22 |
liver primordium | 9.64e-48 | 22 |
digestive tract diverticulum | 1.23e-45 | 23 |
epithelial sac | 6.28e-42 | 25 |
epithelium of foregut-midgut junction | 6.28e-42 | 25 |
anatomical boundary | 6.28e-42 | 25 |
hepatobiliary system | 6.28e-42 | 25 |
foregut-midgut junction | 6.28e-42 | 25 |
septum transversum | 6.28e-42 | 25 |
sac | 2.74e-40 | 26 |
exocrine gland | 1.14e-33 | 31 |
exocrine system | 1.14e-33 | 31 |
endocrine gland | 9.87e-30 | 35 |
abdomen element | 2.29e-28 | 54 |
abdominal segment element | 2.29e-28 | 54 |
abdominal segment of trunk | 2.03e-25 | 60 |
abdomen | 2.03e-25 | 60 |
endocrine system | 6.07e-23 | 45 |
gut epithelium | 5.63e-19 | 54 |
gland | 2.72e-17 | 59 |
trunk region element | 1.30e-14 | 101 |
subdivision of trunk | 4.71e-13 | 112 |
endo-epithelium | 3.51e-12 | 82 |
foregut | 2.00e-11 | 87 |
mesenchyme | 9.69e-09 | 160 |
entire embryonic mesenchyme | 9.69e-09 | 160 |
epithelial tube | 3.07e-08 | 117 |
subdivision of digestive tract | 4.39e-08 | 118 |
trunk mesenchyme | 7.36e-08 | 122 |
trunk | 9.37e-07 | 199 |