FFCP PHASE1:Hg19::chrX:10588502..10588513,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4281 | |EntrezGene=4281 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7095 | |HGNC=7095 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-43bp_to_ENST00000380782_5end | |association_with_transcript=-43bp_to_ENST00000380782_5end | ||
|cluster_id=chrX:10588502..10588513,- | |||
|description=CAGE_peak_9_at_MID1_5end | |description=CAGE_peak_9_at_MID1_5end | ||
|id=chrX:10588502..10588513,- | |id=chrX:10588502..10588513,- | ||
|ontology_enrichment_celltype=CL:0000066!4.63e-11!254 | |ontology_enrichment_celltype=CL:0000066!4.63e-11!254 | ||
|ontology_enrichment_celltype_v019=CL:0000064;4.24e-14;3!CL:0000067;4.24e-14;3!CL:0005012;4.24e-14;3!CL:0002304;4.24e-14;3!CL:0000710;2.20e-07;20!CL:0000075;4.38e-07;27!CL:0000322;4.43e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.34e-14,3;CL:0000067,1.34e-14,3;CL:0005012,1.34e-14,3;CL:0002304,1.34e-14,3;CL:0000710,1.64e-07,20;CL:0000075,3.56e-07,27;CL:0000322,7.38e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!7.25e-12!143;DOID:305!7.26e-12!106;DOID:0050615!2.95e-07!16 | |ontology_enrichment_disease=DOID:0050687!7.25e-12!143;DOID:305!7.26e-12!106;DOID:0050615!2.95e-07!16 | ||
|ontology_enrichment_disease_v019=DOID:3910;3.17e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,6.88e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.02e-12!155;UBERON:0001555!1.02e-12!155;UBERON:0007026!1.02e-12!155;UBERON:0004119!6.79e-12!169;UBERON:0000925!6.79e-12!169;UBERON:0006595!6.79e-12!169;UBERON:0000481!8.35e-12!347;UBERON:0001004!1.02e-10!72;UBERON:0003104!1.52e-08!238;UBERON:0009142!1.52e-08!238;UBERON:0008947!2.04e-08!38;UBERON:0003258!2.04e-08!38;UBERON:0001444!2.68e-08!48;UBERON:0000161!2.92e-08!35;UBERON:0000064!3.60e-08!219;UBERON:0000077!4.01e-08!130;UBERON:0000072!5.31e-08!46;UBERON:0000477!8.26e-08!286;UBERON:0000468!9.20e-08!659;UBERON:0004921!1.28e-07!129;UBERON:0004185!1.28e-07!129;UBERON:0000065!1.31e-07!53;UBERON:0000922!4.02e-07!612 | |ontology_enrichment_uberon=UBERON:0001007!1.02e-12!155;UBERON:0001555!1.02e-12!155;UBERON:0007026!1.02e-12!155;UBERON:0004119!6.79e-12!169;UBERON:0000925!6.79e-12!169;UBERON:0006595!6.79e-12!169;UBERON:0000481!8.35e-12!347;UBERON:0001004!1.02e-10!72;UBERON:0003104!1.52e-08!238;UBERON:0009142!1.52e-08!238;UBERON:0008947!2.04e-08!38;UBERON:0003258!2.04e-08!38;UBERON:0001444!2.68e-08!48;UBERON:0000161!2.92e-08!35;UBERON:0000064!3.60e-08!219;UBERON:0000077!4.01e-08!130;UBERON:0000072!5.31e-08!46;UBERON:0000477!8.26e-08!286;UBERON:0000468!9.20e-08!659;UBERON:0004921!1.28e-07!129;UBERON:0004185!1.28e-07!129;UBERON:0000065!1.31e-07!53;UBERON:0000922!4.02e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0001778;4.24e-14;3!UBERON:0001775;4.24e-14;3!UBERON:0002203;4.30e-12;6!UBERON:0001768;4.30e-12;6!UBERON:0002200;4.30e-12;6!UBERON:0000488;1.08e-10;4!UBERON:0004903;3.17e-10;2!UBERON:0002173;3.17e-10;2!UBERON:0002186;3.17e-10;2!UBERON:0001801;1.05e-07;14!UBERON:0000058;1.10e-07;10!UBERON:0004821;4.43e-07;3!UBERON:0007499;4.43e-07;3!UBERON:0003215;4.43e-07;3!UBERON:0010368;4.43e-07;3!UBERON:0009911;4.43e-07;3!UBERON:0002299;4.43e-07;3!UBERON:0006524;4.43e-07;3!UBERON:0008874;4.43e-07;3!UBERON:0002169;4.43e-07;3!UBERON:0004894;4.43e-07;3!UBERON:0002418;9.83e-07;3!UBERON:0004755;9.83e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.34e-14,3;UBERON:0001775,1.34e-14,3;UBERON:0002203,1.56e-12,6;UBERON:0001768,1.56e-12,6;UBERON:0002200,1.56e-12,6;UBERON:0000488,4.58e-11,4;UBERON:0004903,6.88e-10,2;UBERON:0002173,6.88e-10,2;UBERON:0002186,6.88e-10,2;UBERON:0001801,6.68e-08,14;UBERON:0004821,7.38e-07,3;UBERON:0003215,7.38e-07,3;UBERON:0010368,7.38e-07,3;UBERON:0009911,7.38e-07,3;UBERON:0002299,7.38e-07,3;UBERON:0006524,7.38e-07,3;UBERON:0008874,7.38e-07,3;UBERON:0002169,7.38e-07,3;UBERON:0004894,7.38e-07,3;UBERON:0006876,7.56e-07,11;UBERON:0007625,9.23e-07,11 | |||
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| ||
|short_description=p9@MID1 | |short_description=p9@MID1 | ||
}} | }} |
Latest revision as of 22:04, 18 September 2015
Short description: | p9@MID1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_MID1_5end |
Coexpression cluster: | NA |
Association with transcript: | -43bp_to_ENST00000380782_5end |
EntrezGene: | MID1 |
HGNC: | 7095 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.34e-14 | 3 |
ciliated epithelial cell | 1.34e-14 | 3 |
multi-ciliated epithelial cell | 1.34e-14 | 3 |
non-pigmented ciliary epithelial cell | 1.34e-14 | 3 |
neurecto-epithelial cell | 1.64e-07 | 20 |
columnar/cuboidal epithelial cell | 3.56e-07 | 27 |
pneumocyte | 7.38e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 1.34e-14 | 3 |
ciliary body | 1.34e-14 | 3 |
vasculature of eye | 1.56e-12 | 6 |
uvea | 1.56e-12 | 6 |
vasculature of head | 1.56e-12 | 6 |
atypical epithelium | 4.58e-11 | 4 |
bronchoalveolar duct junction | 6.88e-10 | 2 |
alveolar duct | 6.88e-10 | 2 |
bronchiole | 6.88e-10 | 2 |
anterior segment of eyeball | 6.68e-08 | 14 |
pulmonary alveolus epithelium | 7.38e-07 | 3 |
alveolus | 7.38e-07 | 3 |
pulmonary lobule | 7.38e-07 | 3 |
lobule | 7.38e-07 | 3 |
alveolus of lung | 7.38e-07 | 3 |
alveolar system | 7.38e-07 | 3 |
pulmonary acinus | 7.38e-07 | 3 |
alveolar sac | 7.38e-07 | 3 |
alveolar wall | 7.38e-07 | 3 |
vasculature of organ | 7.56e-07 | 11 |
pigment epithelium of eye | 9.23e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 6.88e-10 | 2 |