FFCP PHASE1:Hg19::chr11:62649426..62649443,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6520 | |EntrezGene=6520 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11026 | |HGNC=11026 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=149bp_to_ENST00000457660_5end | |association_with_transcript=149bp_to_ENST00000457660_5end | ||
|cluster_id=chr11:62649426..62649443,+ | |||
|coexpression_cluster_id=C19 | |coexpression_cluster_id=C19 | ||
|description=CAGE_peak_11_at_SLC3A2_5end | |description=CAGE_peak_11_at_SLC3A2_5end | ||
|id=chr11:62649426..62649443,+ | |id=chr11:62649426..62649443,+ | ||
|ontology_enrichment_celltype=CL:0000548!5.43e-14!679;CL:0000004!5.43e-14!679;CL:0000255!5.43e-14!679;CL:0000012!5.77e-14!682;CL:0000066!1.62e-11!254;CL:0000003!1.52e-09!722;CL:0000860!2.28e-09!45;CL:0002057!5.48e-09!42;CL:0000063!5.55e-08!578 | |ontology_enrichment_celltype=CL:0000548!5.43e-14!679;CL:0000004!5.43e-14!679;CL:0000255!5.43e-14!679;CL:0000012!5.77e-14!682;CL:0000066!1.62e-11!254;CL:0000003!1.52e-09!722;CL:0000860!2.28e-09!45;CL:0002057!5.48e-09!42;CL:0000063!5.55e-08!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.60e-24;33!CL:0002057;5.60e-24;33!CL:0000473;1.41e-15;39!CL:0000234;1.41e-15;39!CL:0000576;1.07e-11;48!CL:0000039;2.57e-08;7!CL:0000586;2.57e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.64e-19,42;CL:0002057,1.64e-19,42;CL:0000473,2.30e-16,48;CL:0000234,2.30e-16,48;CL:0002194,5.38e-12,59;CL:0000576,5.38e-12,59;CL:0000040,5.38e-12,59;CL:0000559,5.38e-12,59;CL:0002009,1.95e-11,61;CL:0000839,3.41e-10,66;CL:0000557,5.74e-10,67;CL:0000766,6.17e-09,72;CL:0000039,8.10e-08,7;CL:0000586,8.10e-08,7 | |||
|ontology_enrichment_development_v019=CL:0002057;3.64e-13;42 | |||
|ontology_enrichment_disease=DOID:305!9.84e-11!106;DOID:0050687!1.12e-09!143;DOID:14566!1.80e-07!239;DOID:162!2.81e-07!235 | |ontology_enrichment_disease=DOID:305!9.84e-11!106;DOID:0050687!1.12e-09!143;DOID:14566!1.80e-07!239;DOID:162!2.81e-07!235 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.52e-09,82;UBERON:0002371,3.73e-09,76;UBERON:0004765,6.81e-08,90;UBERON:0002405,1.92e-07,93;UBERON:0002390,9.48e-07,98;UBERON:0003061,9.48e-07,98 | |||
|phase1_expression=0.726713517082227,0,1.26858963686374,0,0.446961094427288,0,0,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0,0,0.626909442956176,0,0.136874425072884,0,0,0.0821005894499457,0,0,0.383829398097213,0.154816123316076,0,0.30120591877825,0.369754010166788,0.0774672005803016,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0.755751887377619,0.242584061187816,0.697287110717054,2.46700732813095,1.23882548358041,2.01384674625505,2.56160706529101,1.89185783910868,1.72372840368309,0.645484683583826,1.35426486594342,0.752969358170419,3.0019676506363,1.34834090667051,3.67300670845083,3.53021929783703,0.639337125799041,0,0.398927315243264,2.13112375266347,4.06292934080018,2.8369261234557,3.11411124497787,2.00998932205395,1.5644487552606,3.25783267057675,0.605399502633369,2.94622108790052,4.74693581161327,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0.393010762749165,0,0,0,0,0,0,0.294605907474837,0.221533894583621,0,0.128091319725675,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0.201606743224732,0,0,0,0.670700859703636,0.383587685530591,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0.196468613246569,1.45718115317017,0.741568885568859,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0,0.56530794192401,0,0.275118041940067,0,0,0.35576626268671,0.33472061276467,0,0,0,0.367663080345869,0,0,0,0,0,0.949265659568129,0,0,0,0.436094052142534,0.496971951695318,0.506522046658319,0.397227542439656,0,0,0.560677600142307,0,0.49333509683432,0,0.134710672069688,0,0.151357427644931,0,1.40592859100278,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0.204154171254893,0,0.413303124703062,0,0,0,2.87447256726495,0,0.125118519871964,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0.179389635688862,0.427114777637135,0,0,0.206105058476878,0.257640540045629,0.18611685633159,0.337552664482532,0,0.504867548488229,0.184099797284599,0,0.355009592516614,0.10075209822764,0,0,0.545492241181669,0.286804595389004,0.243947412259191,0.397589304964456,0.464775771478074,0,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0.842923450390509,0.241011029883482,0.55146986366197,0.217879444092406,0,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.860919069801795,0.171567810298526,0.439001141634502,2.24803506515239,0.502644862058154,0.185176890317059,1.3032332212413,1.03993478527958,0,0,0.352226082707465,0,0,0.190254152234598,0.790204397959275,0,0,0,0.148631162288728,0.93733833986777,0,0,1.43293636324557,3.77824120068151,0.383382679165211,0,0,0,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.387815147273333,0,0,0,0,0,0,0,0.285955987316295,1.08524321078289,0,0,0,0,0.602878754119172,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0,0.672510863961164,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0,0.535286966391485,0.788512075169673,0.117141414992713,0.300946099727719,0,2.0694614258501,1.32845119707087,0.184369168541703,0.0868836144680828,0.587403472388222,0.686286847621712,0,0,0.106727557803444,0.606255142892519,1.66435439510497,1.20956117331872,0.744323423456331,0.153461973288062,1.12264037773229,1.40953064181271,1.53512174720011,0.64341568457443,0,0.154209693802656,0.532685175939381,0,0,0.232420756919918,2.65890789101569,0,1.01289087829486,1.03333003348146,0.364182336013434,0.393373244878272,0.902399225814824,0,0.784349769176855,0,0,0,0,0.215915916102139,1.54227252690289,0,0,0.254876273045038,0,0,0.438519753291869,0.522870902049801,0,0.328014645699706,0.650756789328606,0,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0.308097234229289,0,0.275673144969061,0.107420244868274,0,0.170453254832202,0.356128142586949,1.81813406897076,0.960950336825531,0.255225424989168,1.0115778085555,0,0,0.6970372701606,0.616067160352178,0.532306030317022,0.869932992075073,0.37064843820784,0.143124886741991,0.744316738719335,0.316379424718726,0.190630193923825,0.255897791311334,0.42793898803392,0.318203247925937,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0.707027159768564,1.13008116620243,0.551365343546124,0,0.876901770507525,0,0,0,0.30982349809975,0.281695602532241,0,0.196498082026242,0.35667105148125,0.709522128141196,0.211107635297664,0,0,1.04980416073495,1.92444225451024,0.670302275535787,6.53345909167936,0.0941438007767792,0.43050537267123,1.68471475667626,0,0,0,0,0,0.238231775457789,0,0,0,0.79312517629427,0,3.84991942105343,0.245040215981032,0,0,0.426851060090485,0,0,0.191505370132367,1.2700414963433,0,0.280797178113459,0,0,0,0.169291777801603,0.321176150207399,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0.540911356951966,0,0,0.18714054040822,0,0,0,0.284136146806413,0.23874448473769,0,0,0,0,0.445234820091624,0.16480387422676,0,0,0,0,0.102268682502155,0,0.622079175323615,0.7189468091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| ||
|short_description=p11@SLC3A2 | |short_description=p11@SLC3A2 | ||
}} | }} |
Latest revision as of 22:09, 18 September 2015
Short description: | p11@SLC3A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SLC3A2_5end |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | 149bp_to_ENST00000457660_5end |
EntrezGene: | SLC3A2 |
HGNC: | 11026 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.64e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.64e-19 | 42 |
defensive cell | 2.30e-16 | 48 |
phagocyte | 2.30e-16 | 48 |
monopoietic cell | 5.38e-12 | 59 |
monocyte | 5.38e-12 | 59 |
monoblast | 5.38e-12 | 59 |
promonocyte | 5.38e-12 | 59 |
macrophage dendritic cell progenitor | 1.95e-11 | 61 |
myeloid lineage restricted progenitor cell | 3.41e-10 | 66 |
granulocyte monocyte progenitor cell | 5.74e-10 | 67 |
myeloid leukocyte | 6.17e-09 | 72 |
germ line cell | 8.10e-08 | 7 |
germ cell | 8.10e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
bone element | 3.52e-09 | 82 |
bone marrow | 3.73e-09 | 76 |
skeletal element | 6.81e-08 | 90 |
immune system | 1.92e-07 | 93 |
hematopoietic system | 9.48e-07 | 98 |
blood island | 9.48e-07 | 98 |