FFCP PHASE1:Hg19::chr3:52444519..52444541,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51533 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18458 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BWX1,Q9NS08 | |||
|association_with_transcript=0bp_to_NM_016483,NM_173341,uc003ddy.2,uc003ddz.2_5end | |||
|cluster_id=chr3:52444519..52444541,+ | |||
|description=CAGE_peak_3_at_PHF7_5end | |||
|id=chr3:52444519..52444541,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,8.03e-07,2;CL:0002489,8.03e-07,2;CL:0000809,8.03e-07,2;CL:0000808,8.03e-07,2;CL:0000894,8.03e-07,2;CL:0000806,8.03e-07,2;CL:0000807,8.03e-07,2;CL:0000805,8.03e-07,2;CL:0002425,8.03e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.51e-12,4;UBERON:0005058,2.51e-12,4;UBERON:0009113,2.51e-12,4;UBERON:0003295,2.51e-12,4;UBERON:0005562,2.51e-12,4;UBERON:0003408,3.21e-10,10;UBERON:0003351,3.34e-08,6;UBERON:0004177,5.07e-07,7;UBERON:0005057,5.07e-07,7 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0.893922188854576,0,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0.263766978228454,0.247532705920093,0.994192127183747,0,0,0,0.487932798790507,0.246242116153576,1.42800483870977,0.626909442956176,0,0.273748850145768,0.627713197974014,0.152826811495903,0.164201178899891,0.393553906568396,0.393364276848904,0,0.309632246632152,0,0.6024118375565,0,1.23947520928483,0.426507697462265,0.880801318004542,0.553995408531877,0,0.217010870715852,0.223915474239924,0.647787332037959,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.425208599930087,0.209658645508376,0.336985893439485,0,0.32145117339416,0.285012743741249,0.19891667719909,0.182664153764634,0,1.63841583378639,0,0,1.60158394814405,1.14950487990897,1.32208974556972,0,0,0,0,0,0,0.526768169550154,0.590129310341499,0.393010762749165,0.205601498999509,0.501559486172034,0.651844533267181,1.89379122293893,0,0.668462741311041,0.589211814949674,0.443067789167242,0,0.384273959177026,0.910415432919148,0.822189523018381,0.552700035571697,0.289803085735052,0.593146252648242,0.535081656179426,0,0.339928028092699,1.14966148080576,1.03088233644789,0.253019692019503,0.318565414324097,0.651083453856419,0,0.903450714466637,0.639933055772092,0,0.710331756132051,0.821127996921047,0.80642697289893,0,0.724122019413995,0,0,0,0.361439152384566,1.00267582127178,0.289693037921647,0,0,0.567208902984407,0.221729397462564,0.527008714158756,1.37528029272598,0.364295288292542,0.741568885568859,0,0,0.132957960518865,1.19245312152671,1.71598473234038,0,0,0.860234595106124,0,0.56530794192401,0,0.550236083880135,0,0,0.35576626268671,0.33472061276467,0.805658634218294,0.760272105718513,0.24406205754817,0,0.81014194788176,0.446498641420399,0.44905874525234,0.337834441449967,0,0,0.366403487860815,0,0,0.872188104285069,0,0.12663051166458,1.45650098894541,0.860509862246441,0,1.12135520028461,0,0.24666754841716,0,0.404132016209064,0.163461903113459,0.605429710579726,0,0.234321431833797,0.312160076830321,0,0.298897361103602,0.939475989150119,0,0,0,0.368502951935304,0.413303124703062,0,0.494533858557114,0.910161361938026,0,0.168336113954066,0.250237039743928,0.554128230968366,0,0.612975591598039,0.150238058906597,0.340296549480063,1.07633781413317,0.640672166455702,0,0.300091096084402,0.412210116953756,0.257640540045629,0.18611685633159,0.168776332241266,0.487185025805993,0.504867548488229,0,0.323292113637624,1.06502877754984,0.705264687593482,0.169560592310488,0.386521706326594,0,0.573609190778008,0.487894824518382,0.397589304964456,0.464775771478074,0.518305275076852,0,1.09493207722749,0,0.643240938192885,0,0.928735856063958,0.721879481669586,0,0.168584690078102,0,0.220587945464788,0,0,0.134831308160164,0,0.38474715694639,0,0,0,1.47008711385542,0,0,0,1.7658523976586,0,0.343135620597051,0.219500570817251,0,0.804231779293047,0.462942225792648,0.651616610620649,0,0,0.34779121492523,0.352226082707465,0.433099343283221,0.925971025153221,0.570762456703795,0,0.858486162094873,0.246217006087397,0.234004265139238,0.148631162288728,0,0.335964256397719,0.141775097242386,0.268675568108545,0,1.15014803749563,0,0.088048434013226,1.03664057770386,0.576479813667846,0.6312121671319,0.317489471460845,0.763976851116555,0,0,0,0.300343057843917,0.571652865261156,0.672786506072164,1.30788020649984,0.22001485746285,0.258543431515556,0,0,0.26593811658487,1.04007436911366,0.771622122786426,0,1.0656887160644,0.285955987316295,0.542621605391443,0,0,0,0,0.301439377059586,0,0.399891964728228,0,0.502257091432126,0,0.718874566474748,1.14861935834114,0,0.144781306667579,0.205476322550383,0.716243852959582,1.68127715990291,0.197030760201927,0,0.256686072559497,0.254094624222463,1.30139853857622,0,1.00509759200609,0,0.749007023947182,0,0,0,1.00034104211935,0,0.831883446123229,0.178428988797162,0.473107245101804,0.468565659970853,0,0,2.0694614258501,0,0.553107505625109,0.260650843404249,0.979005787313703,1.71571711905428,0.206768026122887,1.2942852049117,0.640365346820666,0.303127571446259,0,0.604780586659361,0.744323423456331,0.767309866440312,0,0.128139149255701,0.511707249066704,0.160853921143607,1.48418066444991,0,0,0.410635780069046,0,0.116210378459959,0.120859449591622,0.40101294060657,0.184161977871793,0.34444334449382,0.182091168006717,0.917870904715969,0,0.0770153371044148,0,0,0.211103257785751,0,0.170093705276516,0.215915916102139,1.54227252690289,0.270946437543853,0,0,0.831076008928724,0,0,0.522870902049801,0,0.656029291399411,0,0.309123034943167,0.366277859273374,0.330037999682352,1.14853107599234,0,0,0.193341436584244,0.154048617114644,0.460511024178389,0.689182862422653,0.644521469209642,1.0151168573996,0.596586391912706,0.356128142586949,0.165284915360978,0.384380134730212,1.14851441245126,0.4046311234222,0.929691098594572,0.94443704049192,1.3940745403212,0,0,0.869932992075073,0.18532421910392,0.715624433709956,0.372158369359667,0,0.190630193923825,0.511795582622668,0,0.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| |||
|short_description=p3@PHF7 | |||
}} |
Latest revision as of 23:41, 18 September 2015
Short description: | p3@PHF7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PHF7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_016483, NM_173341, uc003ddy.2, uc003ddz.2_5end |
EntrezGene: | PHF7 |
HGNC: | 18458 |
UniProt: | Q9BWX1Q9NS08 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymocyte | 8.03e-07 | 2 |
double negative thymocyte | 8.03e-07 | 2 |
double-positive, alpha-beta thymocyte | 8.03e-07 | 2 |
DN4 thymocyte | 8.03e-07 | 2 |
DN1 thymic pro-T cell | 8.03e-07 | 2 |
DN2 thymocyte | 8.03e-07 | 2 |
DN3 thymocyte | 8.03e-07 | 2 |
immature single positive thymocyte | 8.03e-07 | 2 |
early T lineage precursor | 8.03e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.51e-12 | 4 |
hemolymphoid system gland | 2.51e-12 | 4 |
thymic region | 2.51e-12 | 4 |
pharyngeal gland | 2.51e-12 | 4 |
thymus primordium | 2.51e-12 | 4 |
gland of gut | 3.21e-10 | 10 |
pharyngeal epithelium | 3.34e-08 | 6 |
hemopoietic organ | 5.07e-07 | 7 |
immune organ | 5.07e-07 | 7 |