FFCP PHASE1:Hg19::chr12:53301072..53301086,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3856 | |EntrezGene=3856 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6446 | |HGNC=6446 | ||
|TSSclassifier=strong | |||
|UniProt=F8VQY3 | |UniProt=F8VQY3 | ||
|association_with_transcript=-228bp_to_ENST00000546542_5end | |association_with_transcript=-228bp_to_ENST00000546542_5end | ||
|cluster_id=chr12:53301072..53301086,- | |||
|description=CAGE_peak_12_at_KRT8_5end | |description=CAGE_peak_12_at_KRT8_5end | ||
|id=chr12:53301072..53301086,- | |id=chr12:53301072..53301086,- | ||
|ontology_enrichment_celltype=CL:0000066!4.19e-21!254 | |ontology_enrichment_celltype=CL:0000066!4.19e-21!254 | ||
|ontology_enrichment_celltype_v019=CL:0000167;9.96e-11;1!CL:0000164;9.96e-11;1!CL:0000502;9.96e-11;1!CL:0000172;9.96e-11;1!CL:0000173;9.96e-11;1!CL:0000082;3.42e-08;19 | |ontology_enrichment_celltype_v019=CL:0000167;9.96e-11;1!CL:0000164;9.96e-11;1!CL:0000502;9.96e-11;1!CL:0000172;9.96e-11;1!CL:0000173;9.96e-11;1!CL:0000082;3.42e-08;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000167,9.97e-11,1;CL:0000164,9.97e-11,1;CL:0000502,9.97e-11,1;CL:0000172,9.97e-11,1;CL:0000173,9.97e-11,1;CL:0002351,9.97e-11,1;CL:0000082,3.46e-08,19;CL:0000066,5.24e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002351;9.96e-11;1!UBERON:0008425;9.96e-11;1!UBERON:0001041;9.20e-08;30 | |ontology_enrichment_development_v019=CL:0002351;9.96e-11;1!UBERON:0008425;9.96e-11;1!UBERON:0001041;9.20e-08;30 | ||
|ontology_enrichment_disease=DOID:305!5.21e-37!106;DOID:0050687!5.21e-30!143;DOID:162!5.02e-25!235;DOID:14566!5.27e-24!239;DOID:299!6.43e-13!25;DOID:0050686!4.43e-08!137;DOID:0050615!3.76e-07!16 | |ontology_enrichment_disease=DOID:305!5.21e-37!106;DOID:0050687!5.21e-30!143;DOID:162!5.02e-25!235;DOID:14566!5.27e-24!239;DOID:299!6.43e-13!25;DOID:0050686!4.43e-08!137;DOID:0050615!3.76e-07!16 | ||
|ontology_enrichment_disease_v019=DOID:9119;3.94e-11;1!DOID:4430;9.96e-11;1!DOID:5093;1.58e-10;4!DOID:1612;1.58e-10;4!DOID:1324;2.48e-10;15!DOID:0050615;1.07e-09;16!DOID:299;1.70e-09;25 | |ontology_enrichment_disease_v019=DOID:9119;3.94e-11;1!DOID:4430;9.96e-11;1!DOID:5093;1.58e-10;4!DOID:1612;1.58e-10;4!DOID:1324;2.48e-10;15!DOID:0050615;1.07e-09;16!DOID:299;1.70e-09;25 | ||
|ontology_enrichment_disease_v019_2=DOID:9119,3.76e-11,1;DOID:0050687,9.50e-11,143;DOID:4430,9.97e-11,1;DOID:5093,1.33e-10,4;DOID:1612,1.33e-10,4;DOID:1324,2.52e-10,15;DOID:0050615,1.08e-09,16;DOID:299,1.72e-09,25;DOID:305,4.26e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0004921!9.35e-15!129;UBERON:0004185!9.35e-15!129;UBERON:0004119!2.80e-14!169;UBERON:0000925!2.80e-14!169;UBERON:0006595!2.80e-14!169;UBERON:0000077!4.01e-14!130;UBERON:0001007!9.47e-13!155;UBERON:0001555!9.47e-13!155;UBERON:0007026!9.47e-13!155;UBERON:0001737!5.67e-10!9;UBERON:0001041!8.87e-10!98;UBERON:0000072!1.84e-08!46;UBERON:0005631!2.16e-08!14;UBERON:0000158!2.16e-08!14;UBERON:0008947!6.27e-08!38;UBERON:0003258!6.27e-08!38;UBERON:0001987!3.31e-07!4;UBERON:0004340!3.31e-07!4;UBERON:0001048!7.02e-07!168 | |ontology_enrichment_uberon=UBERON:0004921!9.35e-15!129;UBERON:0004185!9.35e-15!129;UBERON:0004119!2.80e-14!169;UBERON:0000925!2.80e-14!169;UBERON:0006595!2.80e-14!169;UBERON:0000077!4.01e-14!130;UBERON:0001007!9.47e-13!155;UBERON:0001555!9.47e-13!155;UBERON:0007026!9.47e-13!155;UBERON:0001737!5.67e-10!9;UBERON:0001041!8.87e-10!98;UBERON:0000072!1.84e-08!46;UBERON:0005631!2.16e-08!14;UBERON:0000158!2.16e-08!14;UBERON:0008947!6.27e-08!38;UBERON:0003258!6.27e-08!38;UBERON:0001987!3.31e-07!4;UBERON:0004340!3.31e-07!4;UBERON:0001048!7.02e-07!168 | ||
|ontology_enrichment_uberon_v019=UBERON:0004802;3.42e-08;19!UBERON:0000115;3.42e-08;19!UBERON:0002048;4.28e-07;22!UBERON:0004807;4.28e-07;22!UBERON:0000117;4.28e-07;22!UBERON:0000171;4.28e-07;22!UBERON:0000170;4.28e-07;22!UBERON:0005911;9.67e-07;36 | |ontology_enrichment_uberon_v019=UBERON:0004802;3.42e-08;19!UBERON:0000115;3.42e-08;19!UBERON:0002048;4.28e-07;22!UBERON:0004807;4.28e-07;22!UBERON:0000117;4.28e-07;22!UBERON:0000171;4.28e-07;22!UBERON:0000170;4.28e-07;22!UBERON:0005911;9.67e-07;36 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005153,8.34e-09,37;UBERON:0004802,3.46e-08,19;UBERON:0000115,3.46e-08,19;UBERON:0002048,4.32e-07,22;UBERON:0000117,4.32e-07,22;UBERON:0000171,4.32e-07,22;UBERON:0000170,4.32e-07,22;UBERON:0005597,4.32e-07,22;UBERON:0000118,4.32e-07,22;UBERON:0005157,7.79e-07,47 | |||
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| ||
|short_description=p12@KRT8 | |short_description=p12@KRT8 | ||
}} | }} |
Latest revision as of 01:08, 19 September 2015
Short description: | p12@KRT8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_KRT8_5end |
Coexpression cluster: | NA |
Association with transcript: | -228bp_to_ENST00000546542_5end |
EntrezGene: | KRT8 |
HGNC: | 6446 |
UniProt: | F8VQY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 9.97e-11 | 1 |
enteroendocrine cell | 9.97e-11 | 1 |
type D enteroendocrine cell | 9.97e-11 | 1 |
somatostatin secreting cell | 9.97e-11 | 1 |
pancreatic D cell | 9.97e-11 | 1 |
progenitor cell of endocrine pancreas | 9.97e-11 | 1 |
epithelial cell of lung | 3.46e-08 | 19 |
epithelial cell | 5.24e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
epithelial bud | 8.34e-09 | 37 |
respiratory tract epithelium | 3.46e-08 | 19 |
lung epithelium | 3.46e-08 | 19 |
lung | 4.32e-07 | 22 |
respiratory tube | 4.32e-07 | 22 |
respiration organ | 4.32e-07 | 22 |
pair of lungs | 4.32e-07 | 22 |
lung primordium | 4.32e-07 | 22 |
lung bud | 4.32e-07 | 22 |
epithelial fold | 7.79e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 3.76e-11 | 1 |
cell type cancer | 9.50e-11 | 143 |
somatostatinoma | 9.97e-11 | 1 |
thoracic cancer | 1.33e-10 | 4 |
breast cancer | 1.33e-10 | 4 |
lung cancer | 2.52e-10 | 15 |
respiratory system cancer | 1.08e-09 | 16 |
adenocarcinoma | 1.72e-09 | 25 |
carcinoma | 4.26e-09 | 106 |