FFCP PHASE1:Hg19::chr14:21489232..21489249,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57447 | |EntrezGene=57447 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14460 | |HGNC=14460 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000366204_5end | |||
|cluster_id=chr14:21489232..21489249,- | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_29_at_NDRG2_5end | |||
|id=chr14:21489232..21489249,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.88e-21;1!UBERON:0008801;2.30e-21;1!UBERON:0006965;3.89e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.76e-17!115;UBERON:0006562!1.71e-16!11;UBERON:0003408!3.59e-13!10;UBERON:0001042!8.71e-13!10;UBERON:0009145!8.71e-13!10;UBERON:0001829!3.17e-12!2;UBERON:0003127!3.94e-12!2;UBERON:0000341!5.45e-12!2;UBERON:0000078!2.16e-10!18;UBERON:0000153!4.35e-10!129;UBERON:0007811!4.35e-10!129;UBERON:0001044!5.67e-09!6;UBERON:0003293!5.67e-09!6;UBERON:0003294!5.67e-09!6;UBERON:0010047!5.67e-09!6;UBERON:0000167!5.67e-09!6;UBERON:0000166!8.15e-09!21;UBERON:0000161!1.65e-08!35;UBERON:0000974!1.66e-08!10;UBERON:0001004!3.09e-08!72;UBERON:0001723!5.04e-08!3;UBERON:0001033!5.04e-08!3;UBERON:0010056!5.04e-08!3;UBERON:0001736!5.90e-07!1;UBERON:0006298!5.90e-07!1;UBERON:0001831!6.23e-07!1;UBERON:0001567!6.23e-07!1;UBERON:0008801!6.23e-07!1;UBERON:0002372!9.15e-07!1;UBERON:0001961!9.15e-07!1;UBERON:0001744!9.15e-07!1;UBERON:0001735!9.15e-07!1;UBERON:0002426!9.67e-07!1;UBERON:0003831!9.67e-07!1;UBERON:0003898!9.67e-07!1;UBERON:0004830!9.67e-07!1;UBERON:0001774!9.67e-07!1;UBERON:0003830!9.67e-07!1;UBERON:0005175!9.67e-07!1;UBERON:0003897!9.67e-07!1;UBERON:0001103!9.67e-07!1;UBERON:0010084!9.67e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;5.99e-41;2!UBERON:0003127;1.49e-40;2!UBERON:0000341;3.67e-40;2!UBERON:0001044;9.21e-31;6!UBERON:0003293;9.21e-31;6!UBERON:0003294;9.21e-31;6!UBERON:0010047;9.21e-31;6!UBERON:0003408;9.21e-31;6!UBERON:0000167;9.21e-31;6!UBERON:0001736;1.88e-21;1!UBERON:0001831;2.30e-21;1!UBERON:0001567;2.30e-21;1!UBERON:0002372;6.98e-21;1!UBERON:0001961;6.98e-21;1!UBERON:0001744;6.98e-21;1!UBERON:0001042;6.98e-21;1!UBERON:0001735;6.98e-21;1!UBERON:0000161;3.25e-17;19!UBERON:0000166;3.25e-17;19!UBERON:0000974;3.97e-14;6!UBERON:0001041;1.29e-13;14!UBERON:0003126;2.31e-12;7!UBERON:0001005;2.31e-12;7!UBERON:0000165;8.21e-12;28!UBERON:0004089;2.23e-11;2!UBERON:0006562;3.89e-11;2!UBERON:0007811;1.83e-09;52!UBERON:0000153;4.51e-09;54!UBERON:0004921;1.58e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,5.99e-41,2;UBERON:0003127,1.34e-40,2;UBERON:0000341,4.49e-40,2;UBERON:0001044,9.21e-31,6;UBERON:0003293,9.21e-31,6;UBERON:0003294,9.21e-31,6;UBERON:0010047,9.21e-31,6;UBERON:0000167,9.21e-31,6;UBERON:0001736,1.88e-21,1;UBERON:0006298,1.88e-21,1;UBERON:0001831,2.30e-21,1;UBERON:0001567,2.30e-21,1;UBERON:0008801,2.30e-21,1;UBERON:0002372,9.43e-21,1;UBERON:0001961,9.43e-21,1;UBERON:0001744,9.43e-21,1;UBERON:0001735,9.43e-21,1;UBERON:0003408,8.92e-19,10;UBERON:0000166,6.67e-15,22;UBERON:0003126,2.24e-12,7;UBERON:0001005,2.24e-12,7;UBERON:0000153,1.78e-11,62;UBERON:0007811,1.78e-11,62;UBERON:0000165,2.12e-11,29;UBERON:0000930,2.12e-11,29;UBERON:0004089,2.23e-11,2;UBERON:0001004,1.22e-09,74;UBERON:0000161,3.00e-09,36;UBERON:0000974,7.66e-09,10;UBERON:0007023,2.61e-08,114;UBERON:0001041,3.54e-08,87;UBERON:0001444,7.16e-07,49 | |||
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|short_description=p29@NDRG2 | |||
}} | }} |
Latest revision as of 01:09, 19 September 2015
Short description: | p29@NDRG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_NDRG2_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 0bp_to_ENST00000366204_5end |
EntrezGene: | NDRG2 |
HGNC: | 14460 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 5.99e-41 | 2 |
open tracheal system trachea | 1.34e-40 | 2 |
throat | 4.49e-40 | 2 |
saliva-secreting gland | 9.21e-31 | 6 |
gland of oral region | 9.21e-31 | 6 |
gland of foregut | 9.21e-31 | 6 |
oral gland | 9.21e-31 | 6 |
oral cavity | 9.21e-31 | 6 |
submandibular gland | 1.88e-21 | 1 |
submandibular gland primordium | 1.88e-21 | 1 |
parotid gland | 2.30e-21 | 1 |
cheek | 2.30e-21 | 1 |
parotid gland primordium | 2.30e-21 | 1 |
tonsil | 9.43e-21 | 1 |
mucosa-associated lymphoid tissue | 9.43e-21 | 1 |
lymphoid tissue | 9.43e-21 | 1 |
tonsillar ring | 9.43e-21 | 1 |
gland of gut | 8.92e-19 | 10 |
oral opening | 6.67e-15 | 22 |
trachea | 2.24e-12 | 7 |
respiratory airway | 2.24e-12 | 7 |
anterior region of body | 1.78e-11 | 62 |
craniocervical region | 1.78e-11 | 62 |
mouth | 2.12e-11 | 29 |
stomodeum | 2.12e-11 | 29 |
midface | 2.23e-11 | 2 |
respiratory system | 1.22e-09 | 74 |
orifice | 3.00e-09 | 36 |
neck | 7.66e-09 | 10 |
adult organism | 2.61e-08 | 114 |
foregut | 3.54e-08 | 87 |
subdivision of head | 7.16e-07 | 49 |