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FFCP PHASE1:Hg19::chr12:53343573..53343584,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=3856
|EntrezGene=3856
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=6446
|HGNC=6446
|TSSclassifier=strong
|UniProt=F8W1U3
|UniProt=F8W1U3
|association_with_transcript=-13bp_to_ENST00000548998_5end
|association_with_transcript=-13bp_to_ENST00000548998_5end
|cluster_id=chr12:53343573..53343584,-
|coexpression_cluster_id=C3291
|description=CAGE_peak_6_at_KRT8_5end
|description=CAGE_peak_6_at_KRT8_5end
|id=chr12:53343573..53343584,-
|id=chr12:53343573..53343584,-
|ontology_enrichment_celltype=CL:0000066!1.20e-33!254;CL:0002321!4.17e-18!248;CL:0000220!7.12e-18!246;CL:0000222!3.49e-13!119;CL:0000548!2.39e-11!679;CL:0000004!2.39e-11!679;CL:0000255!2.39e-11!679;CL:0000223!6.21e-11!59;CL:0000012!7.84e-11!682;CL:0000071!2.49e-10!18;CL:0002546!2.49e-10!18;CL:0002139!5.32e-10!24;CL:0000076!1.66e-09!62;CL:0000115!1.78e-09!35;CL:0000213!5.13e-09!57;CL:0000215!5.13e-09!57;CL:0000183!2.24e-08!59;CL:0002078!1.78e-07!44;CL:0002076!2.51e-07!43
|ontology_enrichment_celltype=CL:0000066!1.20e-33!254;CL:0002321!4.17e-18!248;CL:0000220!7.12e-18!246;CL:0000222!3.49e-13!119;CL:0000548!2.39e-11!679;CL:0000004!2.39e-11!679;CL:0000255!2.39e-11!679;CL:0000223!6.21e-11!59;CL:0000012!7.84e-11!682;CL:0000071!2.49e-10!18;CL:0002546!2.49e-10!18;CL:0002139!5.32e-10!24;CL:0000076!1.66e-09!62;CL:0000115!1.78e-09!35;CL:0000213!5.13e-09!57;CL:0000215!5.13e-09!57;CL:0000183!2.24e-08!59;CL:0002078!1.78e-07!44;CL:0002076!2.51e-07!43
|ontology_enrichment_celltype_v019=CL:0000071;6.21e-13;18!CL:0002139;6.81e-13;24!CL:0000115;1.54e-10;36!CL:0002543;2.20e-08;6!CL:0002494;5.65e-08;16
|ontology_enrichment_celltype_v019_2=CL:0000066,1.61e-14,253;CL:0000115,1.91e-13,36;CL:0000071,4.09e-13,18;CL:0002546,4.09e-13,18;CL:0002139,5.33e-13,24;CL:0000222,1.24e-12,121;CL:0002078,1.64e-10,45;CL:0000213,9.76e-10,58;CL:0000215,9.76e-10,58;CL:0002321,1.96e-09,250;CL:0002543,2.08e-08,6;CL:0002494,3.65e-08,16
|ontology_enrichment_development_v019=CL:0002546;6.21e-13;18
|ontology_enrichment_disease=DOID:305!5.20e-12!106;DOID:0050687!2.79e-10!143;DOID:162!1.17e-08!235;DOID:14566!3.15e-08!239
|ontology_enrichment_disease=DOID:305!5.20e-12!106;DOID:0050687!2.79e-10!143;DOID:162!1.17e-08!235;DOID:14566!3.15e-08!239
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003914!8.41e-23!118;UBERON:0000490!2.77e-20!138;UBERON:0001048!1.51e-15!168;UBERON:0004119!2.70e-15!169;UBERON:0000925!2.70e-15!169;UBERON:0006595!2.70e-15!169;UBERON:0002049!2.23e-14!79;UBERON:0007798!2.23e-14!79;UBERON:0003104!3.26e-14!238;UBERON:0009142!3.26e-14!238;UBERON:0000466!1.65e-13!126;UBERON:0004872!2.12e-13!84;UBERON:0001007!1.92e-12!155;UBERON:0001555!1.92e-12!155;UBERON:0007026!1.92e-12!155;UBERON:0000481!2.85e-12!347;UBERON:0004921!3.94e-12!129;UBERON:0004185!3.94e-12!129;UBERON:0000477!5.66e-12!286;UBERON:0005911!6.73e-12!82;UBERON:0002100!7.93e-12!216;UBERON:0005177!9.01e-12!107;UBERON:0001981!1.89e-11!60;UBERON:0007500!1.89e-11!60;UBERON:0004537!1.89e-11!60;UBERON:0006965!1.89e-11!60;UBERON:0000055!3.63e-11!69;UBERON:0000487!1.14e-10!22;UBERON:0004535!1.95e-10!110;UBERON:0001986!2.49e-10!18;UBERON:0004638!2.49e-10!18;UBERON:0004852!2.49e-10!18;UBERON:0004111!4.10e-10!241;UBERON:0000077!6.18e-10!130;UBERON:0000926!6.50e-10!448;UBERON:0004120!6.50e-10!448;UBERON:0006603!6.50e-10!448;UBERON:0000119!9.48e-10!312;UBERON:0005256!1.15e-09!143;UBERON:0001041!1.32e-09!98;UBERON:0001009!1.63e-09!113;UBERON:0000483!2.71e-09!309;UBERON:0007499!8.15e-09!25;UBERON:0009569!1.01e-08!113;UBERON:0000464!2.83e-08!104;UBERON:0006914!3.01e-08!25;UBERON:0003929!3.19e-08!54;UBERON:0009856!4.07e-08!26;UBERON:0005172!5.88e-08!55;UBERON:0005173!5.88e-08!55;UBERON:0000025!6.46e-08!194;UBERON:0008835!1.57e-07!22;UBERON:0003894!1.57e-07!22;UBERON:0009497!2.36e-07!25;UBERON:0000015!2.36e-07!25;UBERON:0002423!2.36e-07!25;UBERON:0006235!2.36e-07!25;UBERON:0004161!2.36e-07!25;UBERON:0000922!5.88e-07!612;UBERON:0009854!7.26e-07!23;UBERON:0002107!7.52e-07!19;UBERON:0006925!7.52e-07!19;UBERON:0008836!7.52e-07!19
|ontology_enrichment_uberon=UBERON:0003914!8.41e-23!118;UBERON:0000490!2.77e-20!138;UBERON:0001048!1.51e-15!168;UBERON:0004119!2.70e-15!169;UBERON:0000925!2.70e-15!169;UBERON:0006595!2.70e-15!169;UBERON:0002049!2.23e-14!79;UBERON:0007798!2.23e-14!79;UBERON:0003104!3.26e-14!238;UBERON:0009142!3.26e-14!238;UBERON:0000466!1.65e-13!126;UBERON:0004872!2.12e-13!84;UBERON:0001007!1.92e-12!155;UBERON:0001555!1.92e-12!155;UBERON:0007026!1.92e-12!155;UBERON:0000481!2.85e-12!347;UBERON:0004921!3.94e-12!129;UBERON:0004185!3.94e-12!129;UBERON:0000477!5.66e-12!286;UBERON:0005911!6.73e-12!82;UBERON:0002100!7.93e-12!216;UBERON:0005177!9.01e-12!107;UBERON:0001981!1.89e-11!60;UBERON:0007500!1.89e-11!60;UBERON:0004537!1.89e-11!60;UBERON:0006965!1.89e-11!60;UBERON:0000055!3.63e-11!69;UBERON:0000487!1.14e-10!22;UBERON:0004535!1.95e-10!110;UBERON:0001986!2.49e-10!18;UBERON:0004638!2.49e-10!18;UBERON:0004852!2.49e-10!18;UBERON:0004111!4.10e-10!241;UBERON:0000077!6.18e-10!130;UBERON:0000926!6.50e-10!448;UBERON:0004120!6.50e-10!448;UBERON:0006603!6.50e-10!448;UBERON:0000119!9.48e-10!312;UBERON:0005256!1.15e-09!143;UBERON:0001041!1.32e-09!98;UBERON:0001009!1.63e-09!113;UBERON:0000483!2.71e-09!309;UBERON:0007499!8.15e-09!25;UBERON:0009569!1.01e-08!113;UBERON:0000464!2.83e-08!104;UBERON:0006914!3.01e-08!25;UBERON:0003929!3.19e-08!54;UBERON:0009856!4.07e-08!26;UBERON:0005172!5.88e-08!55;UBERON:0005173!5.88e-08!55;UBERON:0000025!6.46e-08!194;UBERON:0008835!1.57e-07!22;UBERON:0003894!1.57e-07!22;UBERON:0009497!2.36e-07!25;UBERON:0000015!2.36e-07!25;UBERON:0002423!2.36e-07!25;UBERON:0006235!2.36e-07!25;UBERON:0004161!2.36e-07!25;UBERON:0000922!5.88e-07!612;UBERON:0009854!7.26e-07!23;UBERON:0002107!7.52e-07!19;UBERON:0006925!7.52e-07!19;UBERON:0008836!7.52e-07!19
|ontology_enrichment_uberon_v019=UBERON:0000487;4.03e-13;22!UBERON:0004638;6.21e-13;18!UBERON:0001986;6.21e-13;18!UBERON:0004852;6.21e-13;18!UBERON:0000490;2.10e-12;33!UBERON:0006914;5.70e-11;25!UBERON:0003914;2.17e-09;74!UBERON:0010260;1.10e-08;9!UBERON:0000025;6.70e-08;93!UBERON:0007500;2.53e-07;56!UBERON:0001981;2.53e-07;56!UBERON:0004537;2.53e-07;56!UBERON:0002049;4.84e-07;75!UBERON:0007798;4.84e-07;75!UBERON:0001638;7.28e-07;9!UBERON:0003920;7.28e-07;9!UBERON:0004582;7.28e-07;9
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|short_description=p6@KRT8
|short_description=p6@KRT8
}}
}}

Latest revision as of 01:12, 19 September 2015

Short description:p6@KRT8
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_6_at_KRT8_5end
Coexpression cluster:C3291_large_Fibroblast_Mesenchymal_anaplastic_Renal_cervical_Pericytes
Association with transcript: -13bp_to_ENST00000548998_5end
EntrezGene:KRT8
HGNC: 6446
UniProt: F8W1U3
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data