FFCP PHASE1:Hg19::chr11:64018955..64019030,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5331 | |EntrezGene=5331 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9056 | |HGNC=9056 | ||
|TSSclassifier=strong | |||
|UniProt=Q01970,Q8N1A4 | |UniProt=Q01970,Q8N1A4 | ||
|association_with_transcript=0bp_to_ENST00000279230,ENST00000540288,NM_000932,NM_001184883_5end | |||
|cluster_id=chr11:64018955..64019030,+ | |||
|description=CAGE_peak_1_at_PLCB3_5end | |||
|id=chr11:64018955..64019030,+ | |||
|ontology_enrichment_celltype=CL:0002321!1.89e-25!248;CL:0000220!1.16e-24!246;CL:0000066!5.43e-22!254;CL:0000548!2.54e-18!679;CL:0000004!2.54e-18!679;CL:0000255!2.54e-18!679;CL:0000012!2.45e-17!682;CL:0000055!1.00e-13!180;CL:0000222!7.16e-12!119;CL:0000144!3.48e-11!625;CL:0002371!7.13e-11!591;CL:0000076!1.16e-10!62;CL:0000115!4.04e-09!35;CL:0002078!1.28e-08!44;CL:0000221!6.09e-08!71;CL:0000057!6.16e-08!75;CL:0000063!8.48e-08!578;CL:0000071!2.57e-07!18;CL:0002546!2.57e-07!18;CL:0000003!7.10e-07!722;CL:0002076!7.19e-07!43;CL:0000213!8.79e-07!57;CL:0000215!8.79e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.29e-08;36!CL:0000071;2.77e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,9.43e-26,250;CL:0000066,3.91e-22,253;CL:0000222,4.32e-12,121;CL:0000076,2.88e-10,63;CL:0000115,1.33e-09,36;CL:0002078,4.59e-09,45;CL:0000057,4.38e-08,76;CL:0000221,1.17e-07,72;CL:0000071,2.57e-07,18;CL:0002546,2.57e-07,18;CL:0002076,3.06e-07,42;CL:0000213,3.72e-07,58;CL:0000215,3.72e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;2.77e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.37e-11!659;UBERON:0001981!1.35e-10!60;UBERON:0007500!1.35e-10!60;UBERON:0004537!1.35e-10!60;UBERON:0006965!1.35e-10!60;UBERON:0002049!1.52e-10!79;UBERON:0007798!1.52e-10!79;UBERON:0003914!2.52e-10!118;UBERON:0000055!3.74e-10!69;UBERON:0004872!9.32e-10!84;UBERON:0003102!1.49e-09!95;UBERON:0001637!2.80e-09!42;UBERON:0003509!2.80e-09!42;UBERON:0004572!2.80e-09!42;UBERON:0000467!4.93e-09!625;UBERON:0000480!8.34e-09!626;UBERON:0002100!2.23e-08!216;UBERON:0000486!3.54e-08!82;UBERON:0000487!2.01e-07!22;UBERON:0000922!2.15e-07!612;UBERON:0005256!2.35e-07!143;UBERON:0001986!2.57e-07!18;UBERON:0004638!2.57e-07!18;UBERON:0004852!2.57e-07!18;UBERON:0002097!4.12e-07!40;UBERON:0000490!9.40e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;1.65e-07;74!UBERON:0001637;1.73e-07;42!UBERON:0003509;1.73e-07;42!UBERON:0004572;1.73e-07;42!UBERON:0000487;2.09e-07;22!UBERON:0004638;2.77e-07;18!UBERON:0001986;2.77e-07;18!UBERON:0004852;2.77e-07;18!UBERON:0000490;2.98e-07;33!UBERON:0007500;9.87e-07;56!UBERON:0001981;9.87e-07;56!UBERON:0004537;9.87e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.80e-10,117;UBERON:0007500,1.94e-10,59;UBERON:0001981,1.94e-10,59;UBERON:0004537,1.94e-10,59;UBERON:0006965,1.94e-10,59;UBERON:0002049,2.18e-10,78;UBERON:0007798,2.18e-10,78;UBERON:0000055,5.37e-10,68;UBERON:0003102,8.29e-10,99;UBERON:0004872,1.33e-09,83;UBERON:0001637,2.80e-09,42;UBERON:0003509,2.80e-09,42;UBERON:0004572,2.80e-09,42;UBERON:0002100,1.53e-08,199;UBERON:0000490,3.14e-08,148;UBERON:0000486,5.06e-08,83;UBERON:0007503,6.16e-08,78;UBERON:0000487,2.01e-07,22;UBERON:0004638,2.57e-07,18;UBERON:0001986,2.57e-07,18;UBERON:0004852,2.57e-07,18;UBERON:0002097,9.83e-07,41 | |||
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| ||
|short_description=p1@PLCB3 | |||
}} | }} |
Latest revision as of 02:15, 19 September 2015
Short description: | p1@PLCB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLCB3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000279230, ENST00000540288, NM_000932, NM_001184883_5end |
EntrezGene: | PLCB3 |
HGNC: | 9056 |
UniProt: | Q01970Q8N1A4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 9.43e-26 | 250 |
epithelial cell | 3.91e-22 | 253 |
mesodermal cell | 4.32e-12 | 121 |
squamous epithelial cell | 2.88e-10 | 63 |
endothelial cell | 1.33e-09 | 36 |
meso-epithelial cell | 4.59e-09 | 45 |
fibroblast | 4.38e-08 | 76 |
ectodermal cell | 1.17e-07 | 72 |
blood vessel endothelial cell | 2.57e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.57e-07 | 18 |
endo-epithelial cell | 3.06e-07 | 42 |
lining cell | 3.72e-07 | 58 |
barrier cell | 3.72e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 1.80e-10 | 117 |
epithelial tube open at both ends | 1.94e-10 | 59 |
blood vessel | 1.94e-10 | 59 |
blood vasculature | 1.94e-10 | 59 |
vascular cord | 1.94e-10 | 59 |
vasculature | 2.18e-10 | 78 |
vascular system | 2.18e-10 | 78 |
vessel | 5.37e-10 | 68 |
surface structure | 8.29e-10 | 99 |
splanchnic layer of lateral plate mesoderm | 1.33e-09 | 83 |
artery | 2.80e-09 | 42 |
arterial blood vessel | 2.80e-09 | 42 |
arterial system | 2.80e-09 | 42 |
trunk | 1.53e-08 | 199 |
unilaminar epithelium | 3.14e-08 | 148 |
multilaminar epithelium | 5.06e-08 | 83 |
epithelial vesicle | 6.16e-08 | 78 |
simple squamous epithelium | 2.01e-07 | 22 |
blood vessel endothelium | 2.57e-07 | 18 |
endothelium | 2.57e-07 | 18 |
cardiovascular system endothelium | 2.57e-07 | 18 |
skin of body | 9.83e-07 | 41 |