FFCP PHASE1:Hg19::chr2:190649162..190649274,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5378 | |EntrezGene=5378 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9121 | |HGNC=9121 | ||
|TSSclassifier=strong | |||
|UniProt=F8W8L1,Q5XG96,Q5FBZ3,E9PC40,B7ZAA0,C9JF76,C9JKP0,Q5FBZ8,Q3BDU3 | |UniProt=F8W8L1,Q5XG96,Q5FBZ3,E9PC40,B7ZAA0,C9JF76,C9JKP0,Q5FBZ8,Q3BDU3 | ||
|association_with_transcript=0bp_to_ENST00000342075,ENST00000374826,ENST00000409823,ENST00000409985,ENST00000418224,ENST00000421722,ENST00000424766,ENST00000446877,ENST00000447232,ENST00000450931,uc002urj.2_5end | |association_with_transcript=0bp_to_ENST00000342075,ENST00000374826,ENST00000409823,ENST00000409985,ENST00000418224,ENST00000421722,ENST00000424766,ENST00000446877,ENST00000447232,ENST00000450931,uc002urj.2_5end | ||
|cluster_id=chr2:190649162..190649274,+ | |||
|description=CAGE_peak_1_at_PMS1_5end | |description=CAGE_peak_1_at_PMS1_5end | ||
|id=chr2:190649162..190649274,+ | |id=chr2:190649162..190649274,+ | ||
|ontology_enrichment_celltype=CL:0000945!9.26e-07!24;CL:0000826!9.26e-07!24 | |ontology_enrichment_celltype=CL:0000945!9.26e-07!24;CL:0000826!9.26e-07!24 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,9.26e-07,24;CL:0000826,9.26e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.56e-22!235;DOID:14566!1.09e-21!239;DOID:2531!1.77e-15!51;DOID:0060083!1.77e-15!51;DOID:0050686!2.59e-14!137;DOID:1240!4.15e-12!39;DOID:0050687!1.25e-09!143;DOID:8692!2.37e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.03e-09;39!DOID:2531;1.27e-09;51!DOID:0060083;1.27e-09;51!DOID:8692;5.51e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.56e-22,235;DOID:14566,1.09e-21,239;DOID:2531,1.77e-15,51;DOID:0060083,1.77e-15,51;DOID:0050686,2.58e-14,137;DOID:1240,4.15e-12,39;DOID:0050687,1.25e-09,143;DOID:8692,2.37e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0000073!7.87e-10!94;UBERON:0001016!7.87e-10!94;UBERON:0001017!3.74e-08!82;UBERON:0005743!4.62e-08!86;UBERON:0000955!8.83e-07!69;UBERON:0006238!8.83e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.08e-10,89;UBERON:0001017,2.61e-08,81;UBERON:0000955,6.24e-07,68;UBERON:0006238,6.24e-07,68 | |||
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| ||
|short_description=p1@PMS1 | |short_description=p1@PMS1 | ||
}} | }} |
Latest revision as of 02:28, 19 September 2015
Short description: | p1@PMS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PMS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000342075, ENST00000374826, ENST00000409823, ENST00000409985, ENST00000418224, ENST00000421722, ENST00000424766, ENST00000446877, ENST00000447232, ENST00000450931, uc002urj.2_5end |
EntrezGene: | PMS1 |
HGNC: | 9121 |
UniProt: | F8W8L1Q5XG96Q5FBZ3E9PC40B7ZAA0C9JF76C9JKP0Q5FBZ8Q3BDU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 9.26e-07 | 24 |
pro-B cell | 9.26e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
nervous system | 4.08e-10 | 89 |
central nervous system | 2.61e-08 | 81 |
brain | 6.24e-07 | 68 |
future brain | 6.24e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.56e-22 | 235 |
disease of cellular proliferation | 1.09e-21 | 239 |
hematologic cancer | 1.77e-15 | 51 |
immune system cancer | 1.77e-15 | 51 |
organ system cancer | 2.58e-14 | 137 |
leukemia | 4.15e-12 | 39 |
cell type cancer | 1.25e-09 | 143 |
myeloid leukemia | 2.37e-09 | 31 |