FFCP PHASE1:Hg19::chr3:55515183..55515192,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7474 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12784 | |||
|TSSclassifier=strong | |||
|UniProt=C9J8I8 | |||
|association_with_transcript=31bp_to_ENST00000482079_5end | |||
|cluster_id=chr3:55515183..55515192,- | |||
|coexpression_cluster_id=C1516 | |||
|description=CAGE_peak_12_at_WNT5A_5end | |||
|id=chr3:55515183..55515192,- | |||
|ontology_enrichment_celltype=CL:0000055!7.19e-16!180;CL:0002620!4.59e-15!23;CL:0000057!2.82e-11!75;CL:0000548!1.13e-07!679;CL:0000004!1.13e-07!679;CL:0000255!1.13e-07!679;CL:0000012!1.99e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.93e-16;19!CL:0002620;4.00e-13;23!CL:0000138;4.11e-12;6!CL:0000134;4.58e-11;55!CL:0000346;6.12e-10;3!CL:1000428;6.12e-10;3!CL:0002559;9.84e-10;5!CL:0002577;1.79e-09;3!CL:0002537;2.01e-09;5!CL:0000048;7.49e-09;58!CL:0000034;2.11e-08;69!CL:0000197;6.01e-08;6!CL:0000098;6.01e-08;6!CL:0002167;6.01e-08;6!CL:0000153;6.12e-08;9!CL:0000447;6.12e-08;9!CL:0000723;1.57e-07;61!CL:0002536;2.02e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.15e-16,19;CL:0002620,3.54e-13,23;CL:0000058,2.94e-12,6;CL:0000138,2.94e-12,6;CL:0000346,6.91e-10,3;CL:1000428,6.91e-10,3;CL:0002559,8.33e-10,5;CL:0002577,2.08e-09,3;CL:0002537,2.55e-09,5;CL:0000057,7.86e-09,76;CL:0000197,4.75e-08,6;CL:0000098,4.75e-08,6;CL:0002167,4.75e-08,6;CL:0000153,4.94e-08,9;CL:0000447,4.94e-08,9;CL:0002536,1.93e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!6.78e-12!14;DOID:17!6.26e-07!5;DOID:450!6.26e-07!5;DOID:66!6.26e-07!5;DOID:423!6.26e-07!5;DOID:0080000!6.26e-07!5;DOID:11722!6.26e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:2394;9.19e-12;14!DOID:17;4.23e-10;5!DOID:450;4.23e-10;5!DOID:66;4.23e-10;5!DOID:423;4.23e-10;5!DOID:0080000;4.23e-10;5!DOID:11722;4.23e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.06e-11,14;DOID:17,4.10e-10,5;DOID:450,4.10e-10,5;DOID:66,4.10e-10,5;DOID:423,4.10e-10,5;DOID:0080000,4.10e-10,5;DOID:11722,4.10e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!3.55e-15!95;UBERON:0002097!1.07e-13!40;UBERON:0005631!5.46e-13!14;UBERON:0000158!5.46e-13!14;UBERON:0002199!3.34e-12!45;UBERON:0002416!3.34e-12!45;UBERON:0000914!7.76e-10!83;UBERON:0002329!7.76e-10!83;UBERON:0003077!7.76e-10!83;UBERON:0003059!7.76e-10!83;UBERON:0007282!7.76e-10!83;UBERON:0009618!7.76e-10!83;UBERON:0007285!7.76e-10!83;UBERON:0000305!6.70e-09!7;UBERON:0000478!9.52e-09!24;UBERON:0004871!1.53e-07!8;UBERON:0004290!3.72e-07!70;UBERON:0001737!9.18e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.86e-17;10!UBERON:0000158;2.86e-17;10!UBERON:0000305;7.04e-15;7!UBERON:0000478;2.99e-12;24!UBERON:0002097;1.01e-11;41!UBERON:0000412;6.12e-10;3!UBERON:0001992;6.12e-10;3!UBERON:0002073;9.84e-10;5!UBERON:0002118;3.53e-09;5!UBERON:0003102;5.07e-08;50!UBERON:0002199;5.12e-08;46!UBERON:0002416;5.12e-08;46!UBERON:0001987;3.44e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.95e-23,14;UBERON:0000158,8.95e-23,14;UBERON:0000305,8.82e-15,7;UBERON:0002097,2.66e-14,41;UBERON:0004871,7.77e-13,8;UBERON:0002199,2.64e-12,46;UBERON:0002416,2.64e-12,46;UBERON:0000478,3.12e-12,24;UBERON:0003124,6.40e-10,7;UBERON:0000412,6.91e-10,3;UBERON:0001992,6.91e-10,3;UBERON:0002073,8.33e-10,5;UBERON:0005086,8.33e-10,5;UBERON:0004923,9.43e-10,66;UBERON:0003102,2.00e-09,99;UBERON:0002118,3.18e-09,5;UBERON:0001987,3.83e-07,4;UBERON:0004340,3.83e-07,4 | |||
|phase1_expression=0,0.428201047781966,0,0,0.446961094427288,0,0,0,0,0,0,6.99012390816551,8.17677632508206,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0,0.738726348460727,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61439152384566,10.5280961233537,3.18662341713812,2.3858578411533,1.94653948121054,0,0.443458794925128,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0.149448680551801,0.23486899728753,0.485618833104395,0.280901613404497,0.816616685019573,0.491337269247072,1.13658359293342,13.0680314301026,7.17074094907815,0,0,0.168336113954066,0.125118519871964,1.6623846929051,0.438977620880838,2.75839016219118,2.85452311922534,0.113432183160021,4.48474089222155,8.11518077510556,4.4505699243508,0.900273288253207,3.60683852334536,1.28820270022815,1.48893485065272,0.506328996723799,0,2.77677151668526,4.41839513483037,0.161646056818812,3.90510551768276,0.806016785821122,2.7129694769678,0,0,0,0,0,0,0,0,0,6.25798129319264,3.21620469096443,5.52539685409922,1.85747171212792,0,1.0647612003586,0.505754070234305,0.723033089650446,0.882351781859152,1.52515610864684,0,0.674156540800822,1.17732879075208,0.38474715694639,0,0,0,0,0,0,0,0,0,1.54411029268673,0,0,0,0,0,1.03993478527958,0,0.115930404975077,0.469634776943287,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411309970813294,0,0,0.112131084345361,0,0.2933531432838,0.129271715757778,0,0.845302752556,4.5209479819428,1.04007436911366,0,0,0,0.285955987316295,0,0.823240336780769,0.65147236858747,0.355391948742546,0,1.50719688529793,1.74306691720059,2.0994328148232,0,0,0,0.239624855491583,0,0,1.15825045334063,0.410952645100767,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,1.87173775377726,5.70972764150918,4.1002627908823,2.6942525448324,0.601892199455438,0,1.03473071292505,0,0.368738337083406,1.30325421702124,0,0,0,0,0,1.21251028578504,9.98612637062982,3.32629322662648,0,0,0,0,0,0.160853921143607,0,0,0.532685175939381,0.739144404124282,1.55776328755086,0.232420756919918,0,0,0,0.68888668898764,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,1.16004861950546,0.154048617114644,0,0.413509717453592,0.537101224341368,0.290033387828457,0.170453254832202,0.0890320356467374,0,0,0,0,0,0.94443704049192,0.6970372701606,0,0,0,0.37064843820784,0.286249773483982,0,0.316379424718726,0.762520775695299,0,0,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0,0,0.409499734223957,0.424216295861138,0,0,0,0,0,0,1.62328301570163,0.6196469961995,0,0.573645408816206,0.687743287091848,0.35667105148125,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,3.8605408508243,2.15012491469462,0,0,0.111308705022906,0,0,0,0,0,0,0,1.55519793830904,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0.110579259931225,0,0,0,0,0,8.88748035606609,0,0,0,1.27600463892768,1.92354946143911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483781656445426,0.219267951258557,0.246346371159628,0,0,0.451961481561065,0,0,0,0,0.400794101257669,0,0.799238438328521,0,0,0.514784993585894,0,0,0,0,0.104602846312333,1.12198039399954,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0.653174720218818,0,0,6.47474482784602,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0.895528817321244,0.701139929541673,0,2.08343305802598,1.0062716070103,5.33886732957922,0,0,0,0.443565449968902,0.318593534327405,4.04822800947244,0.621051827505038,0.829412415681711,0.797525143673985,5.73919567992907,1.05180326298053,2.28483127301277,1.22061219961398,2.36403256963327,1.71856891267982,0.464033759878494,5.57334244178062,0.400027764663154,0,0.336749488765919,0,0.192619830407303,0.643324774124777,0.260994291965212,0.906823702049089,0,0,0.537266523244462,0,1.53498834705095,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.81192015931811,0,0,0,0.107824811396682,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,3.062454773532,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0.175871244359621,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860454717640555,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0.5647304101948,0,0.301925687133347,0,0,0.940634592723046,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0.325613074443898,0,1.9307228228694,0,0,0,0,0,0,0 | |||
|short_description=p12@WNT5A | |||
}} |
Latest revision as of 02:54, 19 September 2015
Short description: | p12@WNT5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_WNT5A_5end |
Coexpression cluster: | C1516_amniotic_Fibroblast_Hair_Amniotic_Placental_Chondrocyte_liposarcoma |
Association with transcript: | 31bp_to_ENST00000482079_5end |
EntrezGene: | WNT5A |
HGNC: | 12784 |
UniProt: | C9J8I8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.15e-16 | 19 |
skin fibroblast | 3.54e-13 | 23 |
chondroblast | 2.94e-12 | 6 |
chondrocyte | 2.94e-12 | 6 |
hair follicle dermal papilla cell | 6.91e-10 | 3 |
stem cell of epidermis | 6.91e-10 | 3 |
hair follicle cell | 8.33e-10 | 5 |
placental epithelial cell | 2.08e-09 | 3 |
amnion mesenchymal stem cell | 2.55e-09 | 5 |
fibroblast | 7.86e-09 | 76 |
receptor cell | 4.75e-08 | 6 |
sensory epithelial cell | 4.75e-08 | 6 |
olfactory epithelial cell | 4.75e-08 | 6 |
GAG secreting cell | 4.94e-08 | 9 |
carbohydrate secreting cell | 4.94e-08 | 9 |
amniotic epithelial cell | 1.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 8.95e-23 | 14 |
membranous layer | 8.95e-23 | 14 |
amnion | 8.82e-15 | 7 |
skin of body | 2.66e-14 | 41 |
somatic layer of lateral plate mesoderm | 7.77e-13 | 8 |
integument | 2.64e-12 | 46 |
integumental system | 2.64e-12 | 46 |
extraembryonic structure | 3.12e-12 | 24 |
chorion | 6.40e-10 | 7 |
dermal papilla | 6.91e-10 | 3 |
papillary layer of dermis | 6.91e-10 | 3 |
hair follicle | 8.33e-10 | 5 |
hair follicle placode | 8.33e-10 | 5 |
organ component layer | 9.43e-10 | 66 |
surface structure | 2.00e-09 | 99 |
right ovary | 3.18e-09 | 5 |
placenta | 3.83e-07 | 4 |
allantois | 3.83e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.06e-11 | 14 |
musculoskeletal system disease | 4.10e-10 | 5 |
myotonic disease | 4.10e-10 | 5 |
muscle tissue disease | 4.10e-10 | 5 |
myopathy | 4.10e-10 | 5 |
muscular disease | 4.10e-10 | 5 |
myotonic dystrophy | 4.10e-10 | 5 |