FFCP PHASE1:Hg19::chr1:68915752..68915778,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6121 | |EntrezGene=6121 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10294 | |HGNC=10294 | ||
|TSSclassifier=strong | |||
|UniProt=Q16518 | |UniProt=Q16518 | ||
|association_with_transcript=-110bp_to_ENST00000262340,NM_000329,uc001dei.1_5end | |association_with_transcript=-110bp_to_ENST00000262340,NM_000329,uc001dei.1_5end | ||
|cluster_id=chr1:68915752..68915778,- | |||
|coexpression_cluster_id=C41 | |coexpression_cluster_id=C41 | ||
|description=CAGE_peak_2_at_RPE65_5end | |description=CAGE_peak_2_at_RPE65_5end | ||
|id=chr1:68915752..68915778,- | |id=chr1:68915752..68915778,- | ||
|ontology_enrichment_celltype=CL:0002586!7.94e-19!3;CL:0000149!2.26e-14!4 | |ontology_enrichment_celltype=CL:0002586!7.94e-19!3;CL:0000149!2.26e-14!4 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.39e-66;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p2@RPE65 | |short_description=p2@RPE65 | ||
}} | }} |
Latest revision as of 03:10, 19 September 2015
Short description: | p2@RPE65 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPE65_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | -110bp_to_ENST00000262340, NM_000329, uc001dei.1_5end |
EntrezGene: | RPE65 |
HGNC: | 10294 |
UniProt: | Q16518 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retina | 4.27e-34 | 6 |
photoreceptor array | 4.27e-34 | 6 |
posterior segment of eyeball | 4.27e-34 | 6 |
camera-type eye | 2.29e-11 | 20 |
simple eye | 2.29e-11 | 20 |
immature eye | 2.29e-11 | 20 |
ocular region | 2.29e-11 | 20 |
eyeball of camera-type eye | 2.29e-11 | 20 |
optic cup | 2.29e-11 | 20 |
optic vesicle | 2.29e-11 | 20 |
eye primordium | 2.29e-11 | 20 |
eye | 6.74e-11 | 21 |
visual system | 6.74e-11 | 21 |
face | 1.80e-10 | 22 |
sense organ | 1.01e-09 | 24 |
sensory system | 1.01e-09 | 24 |
entire sense organ system | 1.01e-09 | 24 |
ectodermal placode | 7.41e-08 | 31 |