FFCP PHASE1:Hg19::chr1:183622411..183622422,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=403314 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32152 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WW27 | |||
|association_with_transcript=25bp_to_ENST00000308641,NM_203454,uc001gqn.2_5end | |||
|cluster_id=chr1:183622411..183622422,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_APOBEC4_5end | |||
|id=chr1:183622411..183622422,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!5.41e-22!2;UBERON:0002171!3.65e-12!1;UBERON:0006518!3.65e-12!1;UBERON:0008949!3.65e-12!1;UBERON:0000101!3.65e-12!1;UBERON:0002167!3.65e-12!1;UBERON:0001301!5.05e-12!1;UBERON:0002363!1.81e-11!1;UBERON:0007647!1.81e-11!1;UBERON:0010115!1.81e-11!1;UBERON:0007023!2.08e-11!115;UBERON:0003135!1.95e-09!11;UBERON:0003127!9.96e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.70e-40;1!UBERON:0006518;2.70e-40;1!UBERON:0008949;2.70e-40;1!UBERON:0000101;2.70e-40;1!UBERON:0002167;2.70e-40;1!UBERON:0003127;4.66e-21;2!UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22!UBERON:0003126;5.70e-07;7!UBERON:0001005;5.70e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.21e-40,1;UBERON:0006518,2.21e-40,1;UBERON:0008949,2.21e-40,1;UBERON:0000101,2.21e-40,1;UBERON:0002167,2.21e-40,1;UBERON:0003127,4.66e-21,2;UBERON:0000473,6.64e-21,8;UBERON:0003135,1.62e-15,11;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22;UBERON:0003126,5.70e-07,7;UBERON:0001005,5.70e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0.943225830597996,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.676892955143315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.15295147884028,3.21556956187414,0,0,0.426467963801962,0.476128862927481,0,0,0,0,0,0,0,0,2.79716601031438,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@APOBEC4 | |||
}} |
Latest revision as of 03:59, 19 September 2015
Short description: | p3@APOBEC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_APOBEC4_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 25bp_to_ENST00000308641, NM_203454, uc001gqn.2_5end |
EntrezGene: | APOBEC4 |
HGNC: | 32152 |
UniProt: | Q8WW27 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.21e-40 | 1 |
right lung lobe | 2.21e-40 | 1 |
lower lobe of lung | 2.21e-40 | 1 |
lobe of lung | 2.21e-40 | 1 |
right lung | 2.21e-40 | 1 |
open tracheal system trachea | 4.66e-21 | 2 |
testis | 6.64e-21 | 8 |
male reproductive organ | 1.62e-15 | 11 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |
trachea | 5.70e-07 | 7 |
respiratory airway | 5.70e-07 | 7 |