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FFCP PHASE2:Hg19::chr12:54367012..54367025,+: Difference between revisions

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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:3227 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:5123 |TSSclass...")
 
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|DHSsupport=supported   
|DHSsupport=supported   
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=entrezgene:3227
|EntrezGene=3227
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=HGNC:5123
|HGNC=5123
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=uniprot:O43248
|UniProt=O43248
|association_with_transcript=100bp_to_ENST00000243082_5end
|association_with_transcript=100bp_to_ENST00000243082_5end
|cluster_id=chr12:54367012..54367025,+
|cluster_id=chr12:54367012..54367025,+

Latest revision as of 04:19, 19 September 2015

Short description:p5@HOXC11
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_5_at_HOXC11_5end
Coexpression cluster:C1676_neuroectodermal_synovial_breast_anaplastic_epitheloid_rhabdomyosarcoma_neuroepithelioma
Association with transcript: 100bp_to_ENST00000243082_5end
EntrezGene:HOXC11
HGNC: 5123
UniProt: O43248
Genome view:ZENBU


View on UCSC genome browser


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data