FFCP PHASE1:Hg19::chr6:49712123..49712134,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10321 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16904 | |||
|TSSclassifier=strong | |||
|UniProt=P54108 | |||
|association_with_transcript=0bp_to_ENST00000263045_5end | |||
|cluster_id=chr6:49712123..49712134,- | |||
|coexpression_cluster_id=C4612 | |||
|description=CAGE_peak_3_at_CRISP3_5end | |||
|id=chr6:49712123..49712134,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.10e-09;1!CL:0000164;1.10e-09;1!CL:0000502;1.10e-09;1!CL:0000172;1.10e-09;1!CL:0000173;1.10e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.06e-09,1;CL:0000164,1.06e-09,1;CL:0000502,1.06e-09,1;CL:0000172,1.06e-09,1;CL:0000173,1.06e-09,1;CL:0002351,1.06e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0006298;4.46e-10;1!UBERON:0005754;5.79e-10;1!CL:0002351;1.10e-09;1!UBERON:0009143;2.26e-09;1 | |||
|ontology_enrichment_disease=DOID:1036!1.69e-10!8 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.10e-09;1!DOID:0050619;1.68e-09;1!DOID:1357;1.68e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.06e-09,1;DOID:0050619,1.62e-09,1;DOID:1357,1.62e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.01e-12!115;UBERON:0006947!1.39e-11!3;UBERON:0004054!1.39e-11!3;UBERON:0005904!8.78e-09!4;UBERON:0003127!2.36e-08!2;UBERON:0000077!3.72e-08!130;UBERON:0003135!1.21e-07!11;UBERON:0001007!2.00e-07!155;UBERON:0001555!2.00e-07!155;UBERON:0007026!2.00e-07!155;UBERON:0004921!2.47e-07!129;UBERON:0004185!2.47e-07!129;UBERON:0001004!2.85e-07!72;UBERON:0001041!4.96e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.34e-17;2!UBERON:0006947;1.44e-12;3!UBERON:0004054;1.44e-12;3!UBERON:0001723;2.34e-12;3!UBERON:0001033;2.34e-12;3!UBERON:0001000;3.74e-10;1!UBERON:0005352;3.74e-10;1!UBERON:0001736;4.46e-10;1!UBERON:0000998;5.79e-10;1!UBERON:0006868;5.79e-10;1!UBERON:0005904;1.20e-09;4!UBERON:0002372;1.25e-09;1!UBERON:0001961;1.25e-09;1!UBERON:0001744;1.25e-09;1!UBERON:0001042;1.25e-09;1!UBERON:0001735;1.25e-09;1!UBERON:0001764;1.68e-09;1!UBERON:0001825;1.68e-09;1!UBERON:0000165;1.79e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.34e-17,2;UBERON:0006947,1.44e-12,3;UBERON:0004054,1.44e-12,3;UBERON:0001723,2.40e-12,3;UBERON:0001033,2.40e-12,3;UBERON:0010056,2.40e-12,3;UBERON:0001000,3.74e-10,1;UBERON:0005352,3.74e-10,1;UBERON:0001736,4.46e-10,1;UBERON:0006298,4.46e-10,1;UBERON:0000998,5.79e-10,1;UBERON:0006868,5.79e-10,1;UBERON:0005904,1.20e-09,4;UBERON:0002372,1.25e-09,1;UBERON:0001961,1.25e-09,1;UBERON:0001744,1.25e-09,1;UBERON:0001735,1.25e-09,1;UBERON:0000166,1.45e-09,22;UBERON:0001764,1.62e-09,1;UBERON:0001825,1.62e-09,1;UBERON:0007023,1.49e-08,114;UBERON:0001042,3.73e-08,10;UBERON:0009145,3.73e-08,10;UBERON:0000161,5.36e-08,36;UBERON:0006562,1.87e-07,11;UBERON:0000165,3.31e-07,29;UBERON:0000930,3.31e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.2087242256293,0,0,0,0,0,0,0,0,0,3.69262196843137,5.13865789104368,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,1.59398390600856,0,0,0,0,0,0,0.895105873378046,0,0.887790650732402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,6.27921025580099,0,0.676786981851542,0.392125068635479,0.335643173951685,0,0.635746315921515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782658475728359,0,94.7002566838537,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0.219267951258557,0.0821154570532092,1.93978032976839,0,0,0,0,0,0.195551382734803,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0.704815022316672,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,2.51286554000375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,10.9054976106423,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96232732126285,0,0,0,0,0,0,0,1.85986280589,0,0,0,0,0,49.9063736231522,0,0,14.3951597064916,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,70.5475944542284,0,5.65623713043902,0,0,0,0,0,0,0,0,0,0,0,53.2125968749267,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,7.46318936653433,0,0,0.0620747142958579,0,0,0,10.0149704032602,11.2936989358143,4.17582728690443,6.23983186916284,3.99192427855216,0,0,0,0,0,0.488965776731466,0.813792356631477,0,0,0 | |||
|short_description=p3@CRISP3 | |||
}} |
Latest revision as of 04:57, 19 September 2015
Short description: | p3@CRISP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CRISP3_5end |
Coexpression cluster: | C4612_ductus_smallcell_submaxillary_salivary_acute_seminal_ovary |
Association with transcript: | 0bp_to_ENST00000263045_5end |
EntrezGene: | CRISP3 |
HGNC: | 16904 |
UniProt: | P54108 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.06e-09 | 1 |
enteroendocrine cell | 1.06e-09 | 1 |
type D enteroendocrine cell | 1.06e-09 | 1 |
somatostatin secreting cell | 1.06e-09 | 1 |
pancreatic D cell | 1.06e-09 | 1 |
progenitor cell of endocrine pancreas | 1.06e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.34e-17 | 2 |
male genital duct | 1.44e-12 | 3 |
internal male genitalia | 1.44e-12 | 3 |
tongue | 2.40e-12 | 3 |
gustatory system | 2.40e-12 | 3 |
future tongue | 2.40e-12 | 3 |
vas deferens | 3.74e-10 | 1 |
spermatic cord | 3.74e-10 | 1 |
submandibular gland | 4.46e-10 | 1 |
submandibular gland primordium | 4.46e-10 | 1 |
seminal vesicle | 5.79e-10 | 1 |
seminal fluid secreting gland | 5.79e-10 | 1 |
duct of male reproductive system | 1.20e-09 | 4 |
tonsil | 1.25e-09 | 1 |
mucosa-associated lymphoid tissue | 1.25e-09 | 1 |
lymphoid tissue | 1.25e-09 | 1 |
tonsillar ring | 1.25e-09 | 1 |
oral opening | 1.45e-09 | 22 |
maxillary sinus | 1.62e-09 | 1 |
paranasal sinus | 1.62e-09 | 1 |
adult organism | 1.49e-08 | 114 |
chordate pharynx | 3.73e-08 | 10 |
pharyngeal region of foregut | 3.73e-08 | 10 |
orifice | 5.36e-08 | 36 |
pharynx | 1.87e-07 | 11 |
mouth | 3.31e-07 | 29 |
stomodeum | 3.31e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.06e-09 | 1 |
paranasal sinus cancer | 1.62e-09 | 1 |
maxillary sinus cancer | 1.62e-09 | 1 |