FFCP PHASE1:Hg19::chr2:192543694..192543717,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64859 | |EntrezGene=64859 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26232 | |HGNC=26232 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000435931,uc002uta.2_5end | |association_with_transcript=0bp_to_ENST00000435931,uc002uta.2_5end | ||
|cluster_id=chr2:192543694..192543717,+ | |||
|description=CAGE_peak_6_at_OBFC2A_5end | |description=CAGE_peak_6_at_OBFC2A_5end | ||
|id=chr2:192543694..192543717,+ | |id=chr2:192543694..192543717,+ | ||
|ontology_enrichment_celltype=CL:0000066!7.85e-13!254;CL:0002076!3.54e-10!43;CL:0000766!2.73e-09!76;CL:0000223!3.75e-08!59;CL:0000557!6.15e-08!71;CL:0000063!9.08e-08!578;CL:0002009!1.27e-07!65;CL:0000839!2.55e-07!70;CL:0000076!4.62e-07!62;CL:0002194!7.50e-07!63;CL:0000576!7.50e-07!63;CL:0000040!7.50e-07!63;CL:0000559!7.50e-07!63 | |ontology_enrichment_celltype=CL:0000066!7.85e-13!254;CL:0002076!3.54e-10!43;CL:0000766!2.73e-09!76;CL:0000223!3.75e-08!59;CL:0000557!6.15e-08!71;CL:0000063!9.08e-08!578;CL:0002009!1.27e-07!65;CL:0000839!2.55e-07!70;CL:0000076!4.62e-07!62;CL:0002194!7.50e-07!63;CL:0000576!7.50e-07!63;CL:0000040!7.50e-07!63;CL:0000559!7.50e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000990;5.82e-11;8!CL:0000077;1.64e-09;19!CL:0000039;2.09e-09;7!CL:0000586;2.09e-09;7!CL:0000451;1.04e-08;10!CL:0000453;1.20e-07;5!CL:0000775;1.46e-07;3!CL:0002076;1.75e-07;42!CL:0000094;6.33e-07;8!CL:0002541;8.51e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.60e-11,253;CL:0000990,3.75e-11,8;CL:0000076,1.15e-10,63;CL:0000077,1.74e-09,19;CL:0000039,2.00e-09,7;CL:0000586,2.00e-09,7;CL:0000451,7.31e-09,10;CL:0002076,5.10e-08,42;CL:0000453,1.19e-07,5;CL:0000775,1.47e-07,3;CL:0000094,6.32e-07,8;CL:0002541,7.80e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!7.53e-09!106;DOID:1749!1.30e-08!14 | |ontology_enrichment_disease=DOID:305!7.53e-09!106;DOID:1749!1.30e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.37e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.47e-12,14;DOID:305,4.91e-10,106;DOID:0050687,2.15e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.32e-08!102;UBERON:0003061!2.32e-08!102;UBERON:0002193!1.28e-07!112;UBERON:0004119!7.76e-07!169;UBERON:0000925!7.76e-07!169;UBERON:0006595!7.76e-07!169 | |ontology_enrichment_uberon=UBERON:0002390!2.32e-08!102;UBERON:0003061!2.32e-08!102;UBERON:0002193!1.28e-07!112;UBERON:0004119!7.76e-07!169;UBERON:0000925!7.76e-07!169;UBERON:0006595!7.76e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0000344;2.40e-07;20!UBERON:0000178;3.92e-07;15!UBERON:0000179;3.92e-07;15!UBERON:0000463;3.92e-07;15!UBERON:0003124;8.51e-07;3!UBERON:0000920;8.51e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.49e-07,20;UBERON:0000178,3.79e-07,15;UBERON:0000179,3.79e-07,15;UBERON:0000463,3.79e-07,15;UBERON:0000920,7.80e-07,3 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.422863212287913,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0,0.247532705920093,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0.236132343941038,0,0,0.154816123316076,0.919421224478927,0.30120591877825,0.739508020333575,0,0,0,0,0.200544447470142,0,0.223915474239924,0.971680998056939,0,0.872389432677388,0.377875943688809,0.242584061187816,0.464858073811369,0.411167888021826,0.309706370895104,0.863077176966451,0.256160706529101,0.709446689665756,0.689491361473237,0,0,0.564727018627814,0.545812300115692,1.57306439111559,0.918251677112708,0,0.639337125799041,0.989553900560148,0.598390972864896,0.426224750532694,0.870627715885752,1.13477044938228,1.24564449799115,1.25624332628372,0.521482918420201,0.217188844705117,1.21079900526674,0,0.632924774881769,0.211255286311942,0.425208599930087,0.209658645508376,0.112328631146495,0.150176892841506,0.32145117339416,0,0.19891667719909,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0.668745981562712,0,0,0,0.668462741311041,1.47302953737419,0.221533894583621,0.270803863765016,0.25618263945135,0,0,0,0,0,0,0,0.339928028092699,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0,0.130979075497713,0.364295288292542,0,1.9472843619281,4.00498395788315,3.85578085504709,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0.81014194788176,0.0892997282840798,0,0.225222960966644,0,0,0,13.1780417436063,7.75560528296651,0,0,0.25326102332916,1.05927344650575,0,0,0,0,0,0,0.269421344139376,0.163461903113459,0,0,0,0.312160076830321,0,0.298897361103602,0,0.161872944368132,0.140450806702248,0.61246251376468,0.245668634623536,0,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0.515281080091258,0,0.506328996723799,0.194874010322397,0.252433774244115,0,0.161646056818812,0,0.302256294682921,0,1.15956511897978,1.90922284413584,0,0.243947412259191,0,0.232387885739037,0.725627385107593,0.504641701751257,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0,0.330881918197182,0.217879444092406,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,5.65746817298322,0.171567810298526,0.98775256867763,0,0.402115889646523,1.38882667737794,0,0,0,0,0.117408694235822,0,0,0.380508304469197,0,0,0.492434012174795,4.21207677250628,1.93220510975347,0.93733833986777,1.84780341018745,1.41775097242386,2.32852159027406,0,0,3.94130590316755,0.088048434013226,0.207328115540772,0.144119953416961,0.12624243342638,0.126995788584338,0,0,0,0.102827492703324,0.300343057843917,0,0.112131084345361,0,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0,0,0.904318131178758,1.74306691720059,1.19967589418468,1.2162378064119,1.50677127429638,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0.197030760201927,0,0,0,0,0,0,0,8.23907726341901,8.97484377612075,11.603634376209,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0.256278298511402,0,0,0,0.308419387605311,0,0.410635780069046,0.519254429183621,0.116210378459959,2.65890789101569,0.802025881213139,1.38121483403844,0.229628896329213,0.910455840033585,0.393373244878272,0.902399225814824,2.84956747286335,0,0,0.73886140225013,0,0,0.431831832204279,0,0,0,1.27438136522519,1.66215201785745,0,0,0.261435451024901,0,0,0,1.23649213977267,0,0,2.29706215198469,1.30012049207304,0,0,0,0,0,0,0,0,0.0890320356467374,0.826424576804891,0.576570202095319,1.40373983744043,0.30347334256665,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471249609382746,0.404364963146632,0,0.842516912477962,0,0.974853958525138,0,0.136499911407986,0.424216295861138,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0.281695602532241,0,0.196498082026242,0,0.709522128141196,0,0,0.379473173765715,0,1.53955380360819,0.670302275535787,1.08890984861323,1.03558180854457,0,0,0,0.229723400206959,3.04468565539302,3.0585488285695,2.84823593587081,3.09701308095126,1.64544909234478,2.59389324477087,2.16012574895246,2.37937552888281,0,0,4.16568367167754,0,0,0,0,0,0,0,0.649243880549111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,1.13654458722565,1.90995587790152,0,2.76444631889309,0,0.140669416410513,0.111308705022906,0.329607748453519,0.211125408127993,0,0,0,0,0.861593638227486,0,2.96565558786179,1.07412704805365,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,2.2882828526349,8.50995654364571,0,0,0,0,0.120596438625408,0,0,0,0,0.21787692703798,0,0.0769502585037971,0.113942055847001,2.76676685265672,0.0897576444097721,2.49888955420619,5.42301971544263,1.37396390102793,8.52855641629816,0,0,0,1.1279783030859,1.17637520590644,0,0,0,1.05499032264014,0.652931232636591,1.13082457147153,0,0,0.0884575645033392,0,0,0.123563938946503,0,0,0,0,0.182454789215666,0.782658475728359,0.242780379534093,0,0,0.30607276163049,0.252746318513952,0.300646838828985,0.10368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| ||
|short_description=p6@OBFC2A | |short_description=p6@OBFC2A | ||
}} | }} |
Latest revision as of 05:03, 19 September 2015
Short description: | p6@OBFC2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_OBFC2A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000435931, uc002uta.2_5end |
EntrezGene: | OBFC2A |
HGNC: | 26232 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.60e-11 | 253 |
conventional dendritic cell | 3.75e-11 | 8 |
squamous epithelial cell | 1.15e-10 | 63 |
mesothelial cell | 1.74e-09 | 19 |
germ line cell | 2.00e-09 | 7 |
germ cell | 2.00e-09 | 7 |
dendritic cell | 7.31e-09 | 10 |
endo-epithelial cell | 5.10e-08 | 42 |
Langerhans cell | 1.19e-07 | 5 |
neutrophil | 1.47e-07 | 3 |
granulocyte | 6.32e-07 | 8 |
chorionic membrane mesenchymal stem cell | 7.80e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.49e-07 | 20 |
blood | 3.79e-07 | 15 |
haemolymphatic fluid | 3.79e-07 | 15 |
organism substance | 3.79e-07 | 15 |
egg chorion | 7.80e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.47e-12 | 14 |
carcinoma | 4.91e-10 | 106 |
cell type cancer | 2.15e-08 | 143 |