FFCP PHASE1:Hg19::chr18:30349623..30349635,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=C9JWB5 | |UniProt=C9JWB5 | ||
|association_with_transcript=-122bp_to_ENST00000426194_5end | |association_with_transcript=-122bp_to_ENST00000426194_5end | ||
|cluster_id=chr18:30349623..30349635,+ | |||
|coexpression_cluster_id=C3241 | |||
|description=CAGE_peak_1_at_ENST00000426194_5end | |description=CAGE_peak_1_at_ENST00000426194_5end | ||
|id=chr18:30349623..30349635,+ | |id=chr18:30349623..30349635,+ | ||
|ontology_enrichment_celltype=CL:0000236!2.87e-20!14;CL:0000945!6.05e-15!24;CL:0000826!6.05e-15!24;CL:0002322!1.45e-11!5;CL:0000542!6.07e-07!53;CL:0000051!6.07e-07!53 | |ontology_enrichment_celltype=CL:0000236!2.87e-20!14;CL:0000945!6.05e-15!24;CL:0000826!6.05e-15!24;CL:0002322!1.45e-11!5;CL:0000542!6.07e-07!53;CL:0000051!6.07e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000236;2.09e-41;13!CL:0000945;7.21e-27;24!CL:0000542;4.87e-11;53!CL:0002553;1.52e-08;1!CL:0000785;5.06e-08;1!CL:0000819;5.06e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.88e-38,14;CL:0000945,6.83e-27,24;CL:0000826,6.83e-27,24;CL:0000542,1.09e-13,53;CL:0000051,1.09e-13,53;CL:0000838,1.60e-11,52;CL:0002553,1.41e-08,1;CL:0000819,4.41e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.72e-15;2!CL:0000051;4.87e-11;53!UBERON:0005754;9.79e-09;1!UBERON:0008801;5.06e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;5.06e-08;1!DOID:8675;5.06e-08;1!DOID:12603;5.06e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,4.11e-08,1;DOID:0060073,4.41e-08,1;DOID:8675,4.41e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.90e-10!115;UBERON:0006947!6.74e-09!3;UBERON:0004054!6.74e-09!3;UBERON:0003887!1.70e-07!21;UBERON:0003135!2.87e-07!11;UBERON:0005904!9.92e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;3.05e-22;3!UBERON:0004054;3.05e-22;3!UBERON:0005904;7.87e-17;4!UBERON:0002106;7.13e-10;3!UBERON:0000998;9.79e-09;1!UBERON:0006868;9.79e-09;1!UBERON:0001000;1.05e-08;1!UBERON:0005352;1.05e-08;1!UBERON:0001301;2.89e-08;1!UBERON:0001831;5.06e-08;1!UBERON:0001567;5.06e-08;1!UBERON:0000058;5.15e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.52e-22,3;UBERON:0004054,3.52e-22,3;UBERON:0005904,8.76e-17,4;UBERON:0002106,1.07e-09,3;UBERON:0004854,1.07e-09,3;UBERON:0009034,1.07e-09,3;UBERON:0002095,1.07e-09,3;UBERON:0004782,1.07e-09,3;UBERON:0003281,1.07e-09,3;UBERON:0009664,1.07e-09,3;UBERON:0002296,1.07e-09,3;UBERON:0005602,1.07e-09,3;UBERON:0001179,1.07e-09,3;UBERON:0006293,1.07e-09,3;UBERON:0003887,2.63e-09,12;UBERON:0000998,9.79e-09,1;UBERON:0006868,9.79e-09,1;UBERON:0001000,1.05e-08,1;UBERON:0005352,1.05e-08,1;UBERON:0001301,3.33e-08,1;UBERON:0000945,3.73e-08,8;UBERON:0010039,3.73e-08,8;UBERON:0001831,5.82e-08,1;UBERON:0001567,5.82e-08,1;UBERON:0008801,5.82e-08,1;UBERON:0005172,4.30e-07,54;UBERON:0005173,4.30e-07,54 | |||
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| ||
|short_description=p1@ENST00000426194 | |short_description=p1@ENST00000426194 | ||
}} | }} |
Latest revision as of 06:39, 19 September 2015
Short description: | p1@ENST00000426194 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000426194_5end |
Coexpression cluster: | C3241_thyroid_ductus_seminal_throat_epididymis_serous_renal |
Association with transcript: | -122bp_to_ENST00000426194_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.88e-38 | 14 |
lymphocyte of B lineage | 6.83e-27 | 24 |
pro-B cell | 6.83e-27 | 24 |
lymphocyte | 1.09e-13 | 53 |
common lymphoid progenitor | 1.09e-13 | 53 |
lymphoid lineage restricted progenitor cell | 1.60e-11 | 52 |
lung fibroblast | 1.41e-08 | 1 |
B-1 B cell | 4.41e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.52e-22 | 3 |
internal male genitalia | 3.52e-22 | 3 |
duct of male reproductive system | 8.76e-17 | 4 |
spleen | 1.07e-09 | 3 |
gastrointestinal system mesentery | 1.07e-09 | 3 |
stomach region | 1.07e-09 | 3 |
mesentery | 1.07e-09 | 3 |
gastrointestinal system serosa | 1.07e-09 | 3 |
mesentery of stomach | 1.07e-09 | 3 |
gut mesentery | 1.07e-09 | 3 |
dorsal mesentery | 1.07e-09 | 3 |
dorsal mesogastrium | 1.07e-09 | 3 |
peritoneal cavity | 1.07e-09 | 3 |
spleen primordium | 1.07e-09 | 3 |
intraembryonic coelom | 2.63e-09 | 12 |
seminal vesicle | 9.79e-09 | 1 |
seminal fluid secreting gland | 9.79e-09 | 1 |
vas deferens | 1.05e-08 | 1 |
spermatic cord | 1.05e-08 | 1 |
epididymis | 3.33e-08 | 1 |
stomach | 3.73e-08 | 8 |
food storage organ | 3.73e-08 | 8 |
parotid gland | 5.82e-08 | 1 |
cheek | 5.82e-08 | 1 |
parotid gland primordium | 5.82e-08 | 1 |
abdomen element | 4.30e-07 | 54 |
abdominal segment element | 4.30e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 4.11e-08 | 1 |
lymphatic system cancer | 4.41e-08 | 1 |
lymphosarcoma | 4.41e-08 | 1 |