FFCP PHASE1:Hg19::chr11:64949261..64949276,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=823 | |EntrezGene=823 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1476 | |HGNC=1476 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000530442_5end | |association_with_transcript=0bp_to_ENST00000530442_5end | ||
|cluster_id=chr11:64949261..64949276,+ | |||
|description=CAGE_peak_3_at_CAPN1_5end | |description=CAGE_peak_3_at_CAPN1_5end | ||
|id=chr11:64949261..64949276,+ | |id=chr11:64949261..64949276,+ | ||
|ontology_enrichment_celltype=CL:0002076!4.89e-10!43;CL:0000066!1.31e-09!254;CL:0000223!1.06e-07!59;CL:1000449!1.11e-07!16 | |ontology_enrichment_celltype=CL:0002076!4.89e-10!43;CL:0000066!1.31e-09!254;CL:0000223!1.06e-07!59;CL:1000449!1.11e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.53e-08;15!CL:0002681;4.27e-07;12!CL:0002584;4.27e-07;12!CL:0002076;6.72e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.60e-10,253;CL:0002076,5.72e-10,42;CL:1000449,7.94e-09,15;CL:0000223,1.63e-07,58;CL:0002681,2.71e-07,12;CL:0002584,2.71e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.07e-08!169;UBERON:0000925!2.07e-08!169;UBERON:0006595!2.07e-08!169;UBERON:0006555!4.67e-08!17;UBERON:0005103!4.67e-08!17;UBERON:0000083!4.67e-08!17;UBERON:0009201!4.67e-08!17;UBERON:0004819!4.67e-08!17;UBERON:0006553!4.67e-08!17;UBERON:0003074!4.67e-08!17;UBERON:0003060!4.67e-08!17;UBERON:0003887!8.04e-08!21;UBERON:0004211!1.11e-07!16;UBERON:0001285!1.11e-07!16;UBERON:0007684!1.11e-07!16;UBERON:0003220!1.11e-07!16;UBERON:0004208!1.11e-07!16;UBERON:0001444!2.72e-07!48;UBERON:0000080!5.15e-07!18;UBERON:0002120!5.15e-07!18;UBERON:0004875!5.15e-07!18;UBERON:0005721!5.15e-07!18;UBERON:0005754!5.15e-07!18;UBERON:0007297!5.15e-07!18;UBERON:0003104!6.67e-07!238;UBERON:0009142!6.67e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.53e-08;15!UBERON:0004819;1.53e-08;15!UBERON:0001285;1.53e-08;15!UBERON:0007684;1.53e-08;15!UBERON:0006554;3.80e-07;30!UBERON:0001008;3.80e-07;30!UBERON:0001225;4.27e-07;12!UBERON:0008987;4.27e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006555,3.28e-09,16;UBERON:0004819,3.28e-09,16;UBERON:0004211,7.94e-09,15;UBERON:0009773,7.94e-09,15;UBERON:0001231,7.94e-09,15;UBERON:0001285,7.94e-09,15;UBERON:0007684,7.94e-09,15;UBERON:0004208,7.94e-09,15;UBERON:0004119,1.53e-08,160;UBERON:0000925,1.53e-08,160;UBERON:0006595,1.53e-08,160;UBERON:0006554,1.48e-07,47;UBERON:0003102,1.88e-07,99;UBERON:0001444,2.70e-07,49;UBERON:0001225,2.71e-07,12;UBERON:0008987,2.71e-07,12;UBERON:0001008,4.79e-07,48 | |||
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| ||
|short_description=p3@CAPN1 | |short_description=p3@CAPN1 | ||
}} | }} |
Latest revision as of 06:46, 19 September 2015
Short description: | p3@CAPN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CAPN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000530442_5end |
EntrezGene: | CAPN1 |
HGNC: | 1476 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.60e-10 | 253 |
endo-epithelial cell | 5.72e-10 | 42 |
epithelial cell of nephron | 7.94e-09 | 15 |
endodermal cell | 1.63e-07 | 58 |
kidney cortical cell | 2.71e-07 | 12 |
renal cortical epithelial cell | 2.71e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
excretory tube | 3.28e-09 | 16 |
kidney epithelium | 3.28e-09 | 16 |
nephron epithelium | 7.94e-09 | 15 |
renal tubule | 7.94e-09 | 15 |
nephron tubule | 7.94e-09 | 15 |
nephron | 7.94e-09 | 15 |
uriniferous tubule | 7.94e-09 | 15 |
nephrogenic mesenchyme | 7.94e-09 | 15 |
endoderm-derived structure | 1.53e-08 | 160 |
endoderm | 1.53e-08 | 160 |
presumptive endoderm | 1.53e-08 | 160 |
urinary system structure | 1.48e-07 | 47 |
surface structure | 1.88e-07 | 99 |
subdivision of head | 2.70e-07 | 49 |
cortex of kidney | 2.71e-07 | 12 |
renal parenchyma | 2.71e-07 | 12 |
renal system | 4.79e-07 | 48 |