FFCP PHASE1:Hg19::chr15:78833105..78833192,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5685 | |EntrezGene=5685 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9533 | |HGNC=9533 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000558341,ENST00000559437_5end | |association_with_transcript=0bp_to_ENST00000558341,ENST00000559437_5end | ||
|cluster_id=chr15:78833105..78833192,+ | |||
|description=CAGE_peak_2_at_PSMA4_5end | |description=CAGE_peak_2_at_PSMA4_5end | ||
|id=chr15:78833105..78833192,+ | |id=chr15:78833105..78833192,+ | ||
|ontology_enrichment_celltype=CL:0000048!1.07e-26!430;CL:0000034!4.33e-26!444;CL:0000723!9.44e-26!436;CL:0000144!4.61e-23!625;CL:0002320!1.05e-21!365;CL:0002371!1.87e-20!591;CL:0000134!1.19e-19!358;CL:0000219!5.54e-17!390;CL:0000012!9.90e-17!682;CL:0000548!6.72e-16!679;CL:0000004!6.72e-16!679;CL:0000255!6.72e-16!679;CL:0000003!8.16e-11!722;CL:0000738!7.08e-09!140;CL:0000988!2.03e-07!182;CL:0000063!3.08e-07!578;CL:0000055!8.55e-07!180 | |ontology_enrichment_celltype=CL:0000048!1.07e-26!430;CL:0000034!4.33e-26!444;CL:0000723!9.44e-26!436;CL:0000144!4.61e-23!625;CL:0002320!1.05e-21!365;CL:0002371!1.87e-20!591;CL:0000134!1.19e-19!358;CL:0000219!5.54e-17!390;CL:0000012!9.90e-17!682;CL:0000548!6.72e-16!679;CL:0000004!6.72e-16!679;CL:0000255!6.72e-16!679;CL:0000003!8.16e-11!722;CL:0000738!7.08e-09!140;CL:0000988!2.03e-07!182;CL:0000063!3.08e-07!578;CL:0000055!8.55e-07!180 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.76e-28,427;CL:0000034,1.32e-27,441;CL:0000723,2.25e-27,433;CL:0002320,8.58e-23,361;CL:0000134,1.05e-20,354;CL:0000219,1.35e-17,386;CL:0000738,1.20e-08,136;CL:0000988,4.56e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.49e-21!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.00e-22,371 | |||
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| ||
|short_description=p2@PSMA4 | |short_description=p2@PSMA4 | ||
}} | }} |
Latest revision as of 07:05, 19 September 2015
Short description: | p2@PSMA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PSMA4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000558341, ENST00000559437_5end |
EntrezGene: | PSMA4 |
HGNC: | 9533 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.76e-28 | 427 |
stem cell | 1.32e-27 | 441 |
somatic stem cell | 2.25e-27 | 433 |
connective tissue cell | 8.58e-23 | 361 |
mesenchymal cell | 1.05e-20 | 354 |
motile cell | 1.35e-17 | 386 |
leukocyte | 1.20e-08 | 136 |
hematopoietic cell | 4.56e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.00e-22 | 371 |