FFCP PHASE1:Hg19::chr1:186265958..186265975,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10216 | |EntrezGene=10216 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9364 | |HGNC=9364 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_uc010poo.1_5end | |association_with_transcript=-2bp_to_uc010poo.1_5end | ||
|cluster_id=chr1:186265958..186265975,+ | |||
|coexpression_cluster_id=C536 | |||
|description=CAGE_peak_1_at_PRG4_5end | |description=CAGE_peak_1_at_PRG4_5end | ||
|id=chr1:186265958..186265975,+ | |id=chr1:186265958..186265975,+ | ||
|ontology_enrichment_celltype=CL:0000327!3.78e-12!14;CL:0000153!1.77e-09!9;CL:0000447!1.77e-09!9;CL:0000667!7.42e-08!6;CL:0000058!7.42e-08!6;CL:0000138!7.42e-08!6;CL:0000499!2.78e-07!27;CL:0000569!7.59e-07!4;CL:0000011!7.59e-07!4 | |ontology_enrichment_celltype=CL:0000327!3.78e-12!14;CL:0000153!1.77e-09!9;CL:0000447!1.77e-09!9;CL:0000667!7.42e-08!6;CL:0000058!7.42e-08!6;CL:0000138!7.42e-08!6;CL:0000499!2.78e-07!27;CL:0000569!7.59e-07!4;CL:0000011!7.59e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000153;2.22e-16;9!CL:0000447;2.22e-16;9!CL:0000138;3.37e-13;6!CL:0000327;2.36e-09;15!CL:0000569;3.11e-07;4!CL:0000499;3.20e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,2.17e-16,9;CL:0000447,2.17e-16,9;CL:0000058,3.46e-13,6;CL:0000138,3.46e-13,6;CL:0000327,2.34e-09,15;CL:0000569,3.15e-07,4;CL:0000011,3.15e-07,4;CL:0000499,3.40e-07,28;CL:0002549,9.44e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000011;3.11e-07;4!UBERON:0006965;3.65e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.28e-22!115;UBERON:0007100!1.35e-09!27;UBERON:0001013!4.66e-08!14;UBERON:0000948!7.46e-07!24;UBERON:0005498!7.46e-07!24;UBERON:0004140!7.46e-07!24;UBERON:0009881!7.46e-07!24;UBERON:0004141!7.46e-07!24;UBERON:0003084!7.46e-07!24;UBERON:0007005!7.46e-07!24;UBERON:0004139!7.46e-07!24;UBERON:0004291!7.46e-07!24 | |ontology_enrichment_uberon=UBERON:0007023!6.28e-22!115;UBERON:0007100!1.35e-09!27;UBERON:0001013!4.66e-08!14;UBERON:0000948!7.46e-07!24;UBERON:0005498!7.46e-07!24;UBERON:0004140!7.46e-07!24;UBERON:0009881!7.46e-07!24;UBERON:0004141!7.46e-07!24;UBERON:0003084!7.46e-07!24;UBERON:0007005!7.46e-07!24;UBERON:0004139!7.46e-07!24;UBERON:0004291!7.46e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.04e-09;25!UBERON:0001013;2.38e-09;14!UBERON:0000948;5.30e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.39e-11,114;UBERON:0001013,2.40e-09,14;UBERON:0007100,1.64e-08,27;UBERON:0005629,9.44e-07,2;UBERON:0005358,9.44e-07,2;UBERON:0001886,9.44e-07,2;UBERON:0004086,9.44e-07,2;UBERON:0005282,9.44e-07,2;UBERON:0005281,9.44e-07,2 | |||
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|phase1_expression=2.72517568905835,1.49870366723688,1.40954404095971,0,0,0,2.53299878168311,67.5940264566709,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640456598628376,0.910415432919148,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,3.2529523714611,9.5254203020819,21.2924382872411,1414.81369980391,326.531997973069,0,0,0,1.57174890597255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0.933633106199299,0,0,1.66493170409425,8.64263886719998,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,38.0265104465493,32.4332981503617,25.9947558939818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.1466765716419,0,0,1.690605505112,0,0,0,0,0,0,0,0,1.30294473717494,0,0,0,0,0.199945982364114,0,0,0,0,0,0,4.63300181336253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,0,0,0,0,0,0,5.17365356462525,0,0.553107505625109,0,1.37060810223918,0,0,0,0.106727557803444,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0.160853921143607,0,0,2.13074070375753,3.6135948646076,0.519254429183621,1.85936605535935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,31.9427136107939,0,0,0,0,0,0,0.154048617114644,0.614014698904518,0.137836572484531,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0,0,0,19.4219024473851,4.93942339439853,0,0,0,0,0,29.2787220415783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.0852912605448,0,0,0,0,0,0,0,0,0,0,0,11.9548792950642,0,0,0,0,0,0,0,0,1.7755813014648,0,0,0,0.463840490809256,0,0,0,4.34999745260876,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.72277490225378,0,0,0.123563938946503,0,0.337005664903385,7.2231988256891,0,0,0,0,0.789168805698781,0,0,15.9862046460075,0,0,0,0,0,0,0,0,0,0,0,3.14508002835654,0,0.387025325156341,0.365446585430928,0.246346371159628,1.55182426381471,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39641200636127,0.229160424011684,1.43574604915363,0.798716001995964,3.004582336956,2.00854311697685,2.08268764708851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0,0,0,0,9.29103924285377,0.662091970365432,0,0,0,0,0,0,0,0,101.414145705233,7.95041333473328,0,0,0,0,4.37828391527548,0.314408610199332,1.65695622138878,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,12.5374034424974,0.233713309847224,0.554805861502613,0,0.50313580350515,6.22867855117575,3.43260102595385,2.26846385644859,15.8545944594436,0.147855149989634,0,0,0,1.65882483136342,0,0,0,0,0,0,0,0,0,0,0,2.02049693259551,0,0,1.07220795687463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,1.5794168953344,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0.548257766857182,2.97726707033577,0,0,0,0,1.82089681270989,0,0,0,0,0.0679697329768317,0.197318320688547,0,0,0.549451649953598,0,0,0,0,0,3.64530375300947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,29.4642255677429,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,3.8039015482506,0,0.375935671919414,0.580120991762195,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,1.11598505450025,7.85698568673411,0,0,0,0,0,0,0,0,3.56159881625725,0.267964130156178,0,0,11.088167058851,0,0,0.869046000142011,0,0.954707374172474,0,2.17716747896961,0,0.202056159043763,4.44677673434593,0,0,0,0,0,0,0,0.406896178315738,0,5.03184483977566,0 | ||
|short_description=p1@PRG4 | |short_description=p1@PRG4 | ||
}} | }} |
Latest revision as of 07:12, 19 September 2015
Short description: | p1@PRG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRG4_5end |
Coexpression cluster: | C536_Chondrocyte_Mallassezderived_liver_mesothelioma_Adipocyte_serous_tenocyte |
Association with transcript: | -2bp_to_uc010poo.1_5end |
EntrezGene: | PRG4 |
HGNC: | 9364 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.17e-16 | 9 |
carbohydrate secreting cell | 2.17e-16 | 9 |
chondroblast | 3.46e-13 | 6 |
chondrocyte | 3.46e-13 | 6 |
extracellular matrix secreting cell | 2.34e-09 | 15 |
cardiac mesenchymal cell | 3.15e-07 | 4 |
migratory trunk neural crest cell | 3.15e-07 | 4 |
stromal cell | 3.40e-07 | 28 |
fibroblast of choroid plexus | 9.44e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.39e-11 | 114 |
adipose tissue | 2.40e-09 | 14 |
primary circulatory organ | 1.64e-08 | 27 |
vascular plexus | 9.44e-07 | 2 |
ventricle of nervous system | 9.44e-07 | 2 |
choroid plexus | 9.44e-07 | 2 |
brain ventricle | 9.44e-07 | 2 |
ventricular system of brain | 9.44e-07 | 2 |
ventricular system of central nervous system | 9.44e-07 | 2 |