FFCP PHASE1:Hg19::chr12:56106020..56106031,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3679 | |EntrezGene=3679 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6143 | |HGNC=6143 | ||
|TSSclassifier=strong | |||
|UniProt=G3V2Q6 | |UniProt=G3V2Q6 | ||
|association_with_transcript=9bp_to_ENST00000555809_5end | |||
|cluster_id=chr12:56106020..56106031,- | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_10_at_ITGA7_5end | |||
|id=chr12:56106020..56106031,- | |||
|ontology_enrichment_celltype=CL:0000136!3.84e-23!15;CL:0002617!3.66e-08!2;CL:0000325!1.37e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.75e-50;13!CL:0002617;2.37e-10;2!CL:0002521;2.25e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.22e-43,15;CL:0002617,2.49e-10,2;CL:0002521,2.32e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010226;4.28e-19;1 | |||
|ontology_enrichment_disease=DOID:114!2.47e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:114;3.13e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.72e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.25e-33!115;UBERON:0003080!2.74e-18!42;UBERON:0001049!6.33e-18!57;UBERON:0005068!6.33e-18!57;UBERON:0006241!6.33e-18!57;UBERON:0007135!6.33e-18!57;UBERON:0002616!3.65e-17!59;UBERON:0002780!2.16e-16!41;UBERON:0001890!2.16e-16!41;UBERON:0006240!2.16e-16!41;UBERON:0003075!3.43e-16!86;UBERON:0007284!3.43e-16!86;UBERON:0000955!2.51e-15!69;UBERON:0006238!2.51e-15!69;UBERON:0002346!3.21e-15!90;UBERON:0001893!3.38e-15!34;UBERON:0001869!5.97e-14!32;UBERON:0001950!6.46e-14!20;UBERON:0001017!1.31e-13!82;UBERON:0002791!1.56e-13!33;UBERON:0005743!9.40e-13!86;UBERON:0002619!1.55e-12!22;UBERON:0004151!9.39e-12!3;UBERON:0003978!1.34e-11!3;UBERON:0009751!1.34e-11!3;UBERON:0000946!1.34e-11!3;UBERON:0002523!1.34e-11!3;UBERON:0005983!1.34e-11!3;UBERON:0002165!1.34e-11!3;UBERON:0002062!1.34e-11!3;UBERON:0007280!1.34e-11!3;UBERON:0003056!1.87e-11!61;UBERON:0000073!4.33e-11!94;UBERON:0001016!4.33e-11!94;UBERON:0002020!4.83e-11!34;UBERON:0003528!4.83e-11!34;UBERON:0000956!7.23e-11!25;UBERON:0000203!7.23e-11!25;UBERON:0007100!2.73e-09!27;UBERON:0000200!6.70e-09!6;UBERON:0002133!2.14e-08!2;UBERON:0002081!2.56e-08!2;UBERON:0001897!3.93e-08!2;UBERON:0000153!8.58e-08!129;UBERON:0007811!8.58e-08!129;UBERON:0000025!1.64e-07!194;UBERON:0000033!1.76e-07!123;UBERON:0004121!6.78e-07!169;UBERON:0001871!8.18e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;2.47e-19;1!UBERON:0002084;4.28e-19;1!UBERON:0002426;4.28e-19;1!UBERON:0003831;4.28e-19;1!UBERON:0003898;4.28e-19;1!UBERON:0004830;4.28e-19;1!UBERON:0002082;4.28e-19;1!UBERON:0003830;4.28e-19;1!UBERON:0005175;4.28e-19;1!UBERON:0001774;4.28e-19;1!UBERON:0001103;4.28e-19;1!UBERON:0005090;3.13e-10;2!UBERON:0001630;3.13e-10;2!UBERON:0001443;1.84e-07;11!UBERON:0002190;2.25e-07;3!UBERON:0004151;3.06e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,2.25e-19,1;UBERON:0002426,4.69e-19,1;UBERON:0003831,4.69e-19,1;UBERON:0003898,4.69e-19,1;UBERON:0004830,4.69e-19,1;UBERON:0003830,4.69e-19,1;UBERON:0005175,4.69e-19,1;UBERON:0001774,4.69e-19,1;UBERON:0001103,4.69e-19,1;UBERON:0010084,4.69e-19,1;UBERON:0002084,5.62e-19,1;UBERON:0002082,5.62e-19,1;UBERON:0010226,5.62e-19,1;UBERON:0005090,3.27e-10,2;UBERON:0001630,3.27e-10,2;UBERON:0001443,1.90e-07,11;UBERON:0002190,2.32e-07,3;UBERON:0004151,3.35e-07,3 | |||
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| ||
|short_description=p10@ITGA7 | |||
}} | }} |
Latest revision as of 07:52, 19 September 2015
Short description: | p10@ITGA7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ITGA7_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 9bp_to_ENST00000555809_5end |
EntrezGene: | ITGA7 |
HGNC: | 6143 |
UniProt: | G3V2Q6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.22e-43 | 15 |
adipocyte of breast | 2.49e-10 | 2 |
subcutaneous fat cell | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
surface | 2.25e-19 | 1 |
chest muscle | 4.69e-19 | 1 |
respiratory system muscle | 4.69e-19 | 1 |
skeletal muscle of trunk | 4.69e-19 | 1 |
respiratory system skeletal muscle | 4.69e-19 | 1 |
thoracic segment muscle | 4.69e-19 | 1 |
chest organ | 4.69e-19 | 1 |
muscle of trunk | 4.69e-19 | 1 |
diaphragm | 4.69e-19 | 1 |
future diaphragm | 4.69e-19 | 1 |
heart left ventricle | 5.62e-19 | 1 |
cardiac ventricle | 5.62e-19 | 1 |
future cardiac ventricle | 5.62e-19 | 1 |
muscle structure | 3.27e-10 | 2 |
muscle organ | 3.27e-10 | 2 |
chest | 1.90e-07 | 11 |
subcutaneous adipose tissue | 2.32e-07 | 3 |
cardiac chamber | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.72e-10 | 2 |