FFCP PHASE1:Hg19::chr17:27333311..27333318,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=124925 | |EntrezGene=124925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15955 | |HGNC=15955 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZF9 | |UniProt=F5GZF9 | ||
|association_with_transcript=-148bp_to_ENST00000541381_5end | |association_with_transcript=-148bp_to_ENST00000541381_5end | ||
|cluster_id=chr17:27333311..27333318,- | |||
|coexpression_cluster_id=C97 | |||
|description=CAGE_peak_21_at_SEZ6_5end | |description=CAGE_peak_21_at_SEZ6_5end | ||
|id=chr17:27333311..27333318,- | |id=chr17:27333311..27333318,- | ||
|ontology_enrichment_celltype=CL:0000047!4.84e-10!8 | |ontology_enrichment_celltype=CL:0000047!4.84e-10!8 | ||
|ontology_enrichment_celltype_v019=CL:0000047;4.52e-50;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.07e-13,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;5.56e-26;4!DOID:1325;1.65e-15;7!DOID:3904;1.65e-15;7!DOID:3905;2.19e-12;9!DOID:1324;5.55e-08;15!DOID:0050615;1.45e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,5.56e-26,4;DOID:1325,1.65e-15,7;DOID:3904,1.65e-15,7;DOID:3905,2.19e-12,9;DOID:1324,5.55e-08,15;DOID:0050615,1.45e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0001874!1.30e-19!1;UBERON:0001882!1.88e-19!1;UBERON:0005403!1.88e-19!1;UBERON:0000369!3.57e-19!4;UBERON:0002435!3.57e-19!4;UBERON:0000204!3.57e-19!4;UBERON:0010082!3.57e-19!4;UBERON:0002308!1.04e-18!9;UBERON:0000125!1.04e-18!9;UBERON:0000073!1.82e-14!94;UBERON:0001016!1.82e-14!94;UBERON:0001017!2.76e-13!82;UBERON:0005743!1.16e-12!86;UBERON:0009663!2.18e-11!7;UBERON:0001049!4.70e-11!57;UBERON:0005068!4.70e-11!57;UBERON:0006241!4.70e-11!57;UBERON:0007135!4.70e-11!57;UBERON:0002616!1.11e-10!59;UBERON:0002148!2.99e-10!2;UBERON:0009662!2.99e-10!2;UBERON:0001897!3.58e-10!2;UBERON:0002298!6.34e-10!8;UBERON:0002420!4.61e-09!9;UBERON:0007245!4.61e-09!9;UBERON:0010009!4.61e-09!9;UBERON:0010011!4.61e-09!9;UBERON:0000454!4.61e-09!9;UBERON:0000955!5.33e-09!69;UBERON:0006238!5.33e-09!69;UBERON:0002020!1.27e-08!34;UBERON:0003528!1.27e-08!34;UBERON:0004121!7.00e-08!169;UBERON:0000924!1.10e-07!173;UBERON:0006601!1.10e-07!173;UBERON:0005383!2.05e-07!3;UBERON:0005382!2.05e-07!3;UBERON:0001896!2.63e-07!3;UBERON:0005290!2.63e-07!3;UBERON:0010096!2.63e-07!3;UBERON:0003075!2.63e-07!86;UBERON:0007284!2.63e-07!86;UBERON:0000988!2.97e-07!3;UBERON:0006331!2.97e-07!3;UBERON:0002780!3.25e-07!41;UBERON:0001890!3.25e-07!41;UBERON:0006240!3.25e-07!41;UBERON:0003080!4.72e-07!42;UBERON:0002346!5.65e-07!90;UBERON:0004733!6.54e-07!12;UBERON:0002028!6.54e-07!12;UBERON:0007277!6.54e-07!12 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p21@SEZ6 | |short_description=p21@SEZ6 | ||
}} | }} |
Latest revision as of 08:02, 19 September 2015
Short description: | p21@SEZ6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_SEZ6_5end |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | -148bp_to_ENST00000541381_5end |
EntrezGene: | SEZ6 |
HGNC: | 15955 |
UniProt: | F5GZF9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.07e-13 | 8 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 5.56e-26 | 4 |
bronchus cancer | 1.65e-15 | 7 |
bronchogenic carcinoma | 1.65e-15 | 7 |
lung carcinoma | 2.19e-12 | 9 |
lung cancer | 5.55e-08 | 15 |
respiratory system cancer | 1.45e-07 | 16 |