FFCP PHASE1:Hg19::chr4:89658763..89658771,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10144 | |EntrezGene=10144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19367 | |HGNC=19367 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_ENST00000511623_5end | |association_with_transcript=18bp_to_ENST00000511623_5end | ||
|cluster_id=chr4:89658763..89658771,- | |||
|coexpression_cluster_id=C113 | |coexpression_cluster_id=C113 | ||
|description=CAGE_peak_42_at_FAM13A_5end | |description=CAGE_peak_42_at_FAM13A_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;8.14e-07;12 | |ontology_enrichment_celltype_v019=CL:0000182;8.14e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.92e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.40e-14;5!UBERON:0004161;2.55e-07;11 | |ontology_enrichment_development_v019=UBERON:0007123;1.40e-14;5!UBERON:0004161;2.55e-07;11 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002046!2.11e-14!5;UBERON:0004117!2.11e-14!5;UBERON:0007689!2.11e-14!5;UBERON:0007123!2.11e-14!5;UBERON:0003091!2.11e-14!5;UBERON:0000341!1.33e-09!2;UBERON:0002368!5.36e-08!35;UBERON:0003929!9.15e-08!54;UBERON:0002530!4.19e-07!59;UBERON:0005911!4.28e-07!82;UBERON:0009722!4.85e-07!11;UBERON:0007690!4.85e-07!11 | |ontology_enrichment_uberon=UBERON:0002046!2.11e-14!5;UBERON:0004117!2.11e-14!5;UBERON:0007689!2.11e-14!5;UBERON:0007123!2.11e-14!5;UBERON:0003091!2.11e-14!5;UBERON:0000341!1.33e-09!2;UBERON:0002368!5.36e-08!35;UBERON:0003929!9.15e-08!54;UBERON:0002530!4.19e-07!59;UBERON:0005911!4.28e-07!82;UBERON:0009722!4.85e-07!11;UBERON:0007690!4.85e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.66e-15;19!UBERON:0006925;5.66e-15;19!UBERON:0002368;1.05e-14;33!UBERON:0002046;1.40e-14;5!UBERON:0002423;1.15e-11;25!UBERON:0000949;8.55e-11;43!UBERON:0002365;6.52e-10;31!UBERON:0002330;6.52e-10;31!UBERON:0002530;4.18e-07;57 | |ontology_enrichment_uberon_v019=UBERON:0002107;5.66e-15;19!UBERON:0006925;5.66e-15;19!UBERON:0002368;1.05e-14;33!UBERON:0002046;1.40e-14;5!UBERON:0002423;1.15e-11;25!UBERON:0000949;8.55e-11;43!UBERON:0002365;6.52e-10;31!UBERON:0002330;6.52e-10;31!UBERON:0002530;4.18e-07;57 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002368,5.55e-18,35;UBERON:0002107,5.66e-15,19;UBERON:0006925,5.66e-15,19;UBERON:0008836,5.66e-15,19;UBERON:0002046,1.40e-14,5;UBERON:0004117,1.40e-14,5;UBERON:0007689,1.40e-14,5;UBERON:0007123,1.40e-14,5;UBERON:0003091,1.40e-14,5;UBERON:0000949,3.03e-14,45;UBERON:0008835,4.26e-13,22;UBERON:0003894,4.26e-13,22;UBERON:0009854,1.41e-12,23;UBERON:0003929,4.68e-12,54;UBERON:0007499,1.15e-11,25;UBERON:0009497,1.15e-11,25;UBERON:0000015,1.15e-11,25;UBERON:0002423,1.15e-11,25;UBERON:0006235,1.15e-11,25;UBERON:0004161,1.15e-11,25;UBERON:0009856,2.91e-11,26;UBERON:0002530,3.99e-11,59;UBERON:0002365,1.25e-09,31;UBERON:0002330,1.25e-09,31;UBERON:0005911,2.70e-08,82;UBERON:0009722,2.32e-07,11;UBERON:0007690,2.32e-07,11 | |||
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|short_description=p42@FAM13A | |short_description=p42@FAM13A | ||
}} | }} |
Latest revision as of 08:06, 19 September 2015
Short description: | p42@FAM13A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_42_at_FAM13A_5end |
Coexpression cluster: | C113_thyroid_throat_lung_lymph_small_colon_trachea |
Association with transcript: | 18bp_to_ENST00000511623_5end |
EntrezGene: | FAM13A |
HGNC: | 19367 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.92e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
endocrine gland | 5.55e-18 | 35 |
liver | 5.66e-15 | 19 |
digestive gland | 5.66e-15 | 19 |
liver bud | 5.66e-15 | 19 |
thyroid gland | 1.40e-14 | 5 |
pharyngeal pouch | 1.40e-14 | 5 |
thyroid diverticulum | 1.40e-14 | 5 |
pharyngeal pouch 2 | 1.40e-14 | 5 |
thyroid primordium | 1.40e-14 | 5 |
endocrine system | 3.03e-14 | 45 |
hepatic diverticulum | 4.26e-13 | 22 |
liver primordium | 4.26e-13 | 22 |
digestive tract diverticulum | 1.41e-12 | 23 |
gut epithelium | 4.68e-12 | 54 |
epithelial sac | 1.15e-11 | 25 |
epithelium of foregut-midgut junction | 1.15e-11 | 25 |
anatomical boundary | 1.15e-11 | 25 |
hepatobiliary system | 1.15e-11 | 25 |
foregut-midgut junction | 1.15e-11 | 25 |
septum transversum | 1.15e-11 | 25 |
sac | 2.91e-11 | 26 |
gland | 3.99e-11 | 59 |
exocrine gland | 1.25e-09 | 31 |
exocrine system | 1.25e-09 | 31 |
endo-epithelium | 2.70e-08 | 82 |
entire pharyngeal arch endoderm | 2.32e-07 | 11 |
early pharyngeal endoderm | 2.32e-07 | 11 |