FFCP PHASE1:Hg19::chr7:73245829..73245841,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1364 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2046 | |||
|TSSclassifier=strong | |||
|UniProt=O14493 | |||
|association_with_transcript=297bp_to_BT006989,EU831435,EU831527_5end | |||
|cluster_id=chr7:73245829..73245841,+ | |||
|description=CAGE_peak_3_at_CLDN4_5end | |||
|id=chr7:73245829..73245841,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.76e-18!254;CL:0000039!4.07e-10!7;CL:0000586!4.07e-10!7;CL:0000223!2.50e-08!59;CL:0002076!5.47e-08!43 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.88e-11;3!CL:1000497;3.25e-11;17!CL:0002518;3.25e-11;17!CL:0000313;6.46e-09;1!CL:1000449;2.35e-08;15!CL:1000507;2.32e-07;10!CL:1000494;2.32e-07;10!CL:0002537;2.79e-07;5!CL:0000349;7.96e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.57e-11,3;CL:1000497,4.09e-11,17;CL:0002518,4.09e-11,17;CL:0000313,5.75e-09,1;CL:1000449,3.01e-08,15;CL:0002537,2.70e-07,5;CL:1000507,2.99e-07,10;CL:1000494,2.99e-07,10;CL:0000349,7.43e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.74e-09;1 | |||
|ontology_enrichment_disease=DOID:305!3.16e-28!106;DOID:0050687!6.77e-21!143;DOID:299!8.97e-13!25;DOID:14566!2.02e-09!239;DOID:162!2.26e-09!235 | |||
|ontology_enrichment_disease_v019=DOID:5093;7.41e-18;4!DOID:1612;7.41e-18;4!DOID:299;2.25e-14;25!DOID:178;6.46e-09;1!DOID:326;6.46e-09;1!DOID:3978;6.46e-09;1!DOID:3394;6.46e-09;1!DOID:2152;6.46e-09;1!DOID:5844;6.46e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,8.34e-18,4;DOID:1612,8.34e-18,4;DOID:299,2.21e-14,25;DOID:178,3.58e-09,1;DOID:326,3.58e-09,1;DOID:3978,3.58e-09,1;DOID:3394,3.58e-09,1;DOID:5844,3.58e-09,1;DOID:2152,5.75e-09,1;DOID:305,5.91e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0005156!1.68e-11!59;UBERON:0000990!1.68e-11!59;UBERON:0006554!2.66e-11!44;UBERON:0004119!3.28e-11!169;UBERON:0000925!3.28e-11!169;UBERON:0006595!3.28e-11!169;UBERON:0001008!6.39e-11!45;UBERON:0004921!2.74e-10!129;UBERON:0004185!2.74e-10!129;UBERON:0000464!3.15e-10!104;UBERON:0000466!4.36e-10!126;UBERON:0001007!8.24e-10!155;UBERON:0001555!8.24e-10!155;UBERON:0007026!8.24e-10!155;UBERON:0003101!2.77e-09!22;UBERON:0000079!2.77e-09!22;UBERON:0003064!3.56e-09!37;UBERON:0005631!4.68e-09!14;UBERON:0000158!4.68e-09!14;UBERON:0003124!8.45e-09!7;UBERON:0004175!1.44e-08!25;UBERON:0003133!2.86e-08!48;UBERON:0000077!4.33e-08!130;UBERON:0005177!4.44e-08!107;UBERON:0005911!1.28e-07!82;UBERON:0009569!1.50e-07!113;UBERON:0000995!1.65e-07!21;UBERON:0005153!1.87e-07!37;UBERON:0000058!2.08e-07!26;UBERON:0000489!3.49e-07!32;UBERON:0005795!4.71e-07!22;UBERON:0003975!4.71e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;7.32e-13;10!UBERON:0000158;7.32e-13;10!UBERON:0003124;1.88e-11;3!UBERON:0000920;1.88e-11;3!UBERON:0001723;4.65e-11;3!UBERON:0001033;4.65e-11;3!UBERON:0004911;6.46e-09;1!UBERON:0006555;2.35e-08;15!UBERON:0004819;2.35e-08;15!UBERON:0001285;2.35e-08;15!UBERON:0007684;2.35e-08;15!UBERON:0000478;4.11e-08;24!UBERON:0002113;6.89e-08;24!UBERON:0011143;6.89e-08;24!UBERON:0000310;1.87e-07;10!UBERON:0004211;2.32e-07;10!UBERON:0009773;2.32e-07;10!UBERON:0001231;2.32e-07;10!UBERON:0004810;2.32e-07;10!UBERON:0001443;8.13e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.57e-11,3;UBERON:0001723,8.14e-11,3;UBERON:0001033,8.14e-11,3;UBERON:0010056,8.14e-11,3;UBERON:0005631,2.86e-09,14;UBERON:0000158,2.86e-09,14;UBERON:0004911,5.75e-09,1;UBERON:0004211,3.01e-08,15;UBERON:0009773,3.01e-08,15;UBERON:0001231,3.01e-08,15;UBERON:0001285,3.01e-08,15;UBERON:0007684,3.01e-08,15;UBERON:0004208,3.01e-08,15;UBERON:0000478,3.84e-08,24;UBERON:0006555,9.67e-08,16;UBERON:0004819,9.67e-08,16;UBERON:0000310,1.96e-07,10;UBERON:0004810,2.99e-07,10;UBERON:0002113,3.34e-07,26;UBERON:0003918,3.34e-07,26;UBERON:0011143,3.34e-07,26;UBERON:0005095,3.34e-07,26;UBERON:0007687,3.34e-07,26;UBERON:0001443,8.48e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,2.09340350391728,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,2.57545848628462,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.907170879989041,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,1.69203229428271,0.40101294060657,0.736647911487171,0,0,0,0.902399225814824,1.15523005656622,0,1.46139224653261,0.73886140225013,0,0,0,0,0,1.00337954770971,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,3.58116727106535,0,2.45728561679386,0,0,0,0,0,0,0,0.503865495708552,0.102268682502155,0,0,0,0.358042349351218,0,0.295930216910801,0,0,0,0,0,1.04171104434093,0,0,0.341380344856499,1.27126825146383,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0.69169171316418,0.179515288819544,0.434589487688032,7.33702667383415,0.183195186803725,1.5991043280559,0,0,0,0,0,0,0,0,0.421996129056054,1.63232808159148,0.141353071433941,0,0.995261931078505,0.0884575645033392,1.83309043480088,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0,3.12407529003236,0.0979923974143777,0,0.34945333648406,0,0.19351266257817,0,0.328461828212837,0.290967049465258,0,0.451961481561065,0,0,0,0.586654148204409,0.0801588202515337,0,0,0.288180834308212,0,0.171594997861965,0.14405479798815,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,1.99679000498991,0,0,0,0,0,0,0.247247575143499,0.13480708770837,0.0984274815147488,0,0,0,0,0.275078873194468,0.415440338029185,0,0,0,0.335434687599266,0.0788057072991982,0.104909176269996,0,0.179287339332845,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0.11796972334774,0,0.693153996902029,0,0,0,0,0,0,0.261906694481422,0,0.591424344868181,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.443511850813194,0,0,0,0,0.118193840883968,0.222462803784138,0.470958557103084,0,0,0,0,3.8220135030964,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,3.2074961596167,0.31020638566432,0,1.56597604516909,0,0.731507549893617,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0,0.301925687133347,0.848915739187391,0.655678681511872,3.29222107453066,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0.320965466756673,0,0.917458566809082,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0.534434810531121,0.0918948995348449,0.250707539292375,0.0757786982182394,0,0,0,1.49263787330687,0,0,0,0,0.636471582781649,0,1.08858373948481,1.02669990325584,0,0.143444410785353,0.665320713092027,0.162806537221949,0,0,0,4.69281884806909,0,0,0,0.201273793591026,0 | |||
|short_description=p3@CLDN4 | |||
}} |
Latest revision as of 10:34, 19 September 2015
Short description: | p3@CLDN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CLDN4_5end |
Coexpression cluster: | NA |
Association with transcript: | 297bp_to_BT006989, EU831435, EU831527_5end |
EntrezGene: | CLDN4 |
HGNC: | 2046 |
UniProt: | O14493 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.57e-11 | 3 |
kidney cell | 4.09e-11 | 17 |
kidney epithelial cell | 4.09e-11 | 17 |
serous secreting cell | 5.75e-09 | 1 |
epithelial cell of nephron | 3.01e-08 | 15 |
amnion mesenchymal stem cell | 2.70e-07 | 5 |
kidney tubule cell | 2.99e-07 | 10 |
nephron tubule epithelial cell | 2.99e-07 | 10 |
extraembryonic cell | 7.43e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.57e-11 | 3 |
tongue | 8.14e-11 | 3 |
gustatory system | 8.14e-11 | 3 |
future tongue | 8.14e-11 | 3 |
extraembryonic membrane | 2.86e-09 | 14 |
membranous layer | 2.86e-09 | 14 |
epithelium of female gonad | 5.75e-09 | 1 |
nephron epithelium | 3.01e-08 | 15 |
renal tubule | 3.01e-08 | 15 |
nephron tubule | 3.01e-08 | 15 |
nephron | 3.01e-08 | 15 |
uriniferous tubule | 3.01e-08 | 15 |
nephrogenic mesenchyme | 3.01e-08 | 15 |
extraembryonic structure | 3.84e-08 | 24 |
excretory tube | 9.67e-08 | 16 |
kidney epithelium | 9.67e-08 | 16 |
breast | 1.96e-07 | 10 |
nephron tubule epithelium | 2.99e-07 | 10 |
kidney | 3.34e-07 | 26 |
kidney mesenchyme | 3.34e-07 | 26 |
upper urinary tract | 3.34e-07 | 26 |
kidney rudiment | 3.34e-07 | 26 |
kidney field | 3.34e-07 | 26 |
chest | 8.48e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.34e-18 | 4 |
breast cancer | 8.34e-18 | 4 |
adenocarcinoma | 2.21e-14 | 25 |
vascular disease | 3.58e-09 | 1 |
ischemia | 3.58e-09 | 1 |
extrinsic cardiomyopathy | 3.58e-09 | 1 |
myocardial ischemia | 3.58e-09 | 1 |
myocardial infarction | 3.58e-09 | 1 |
ovary epithelial cancer | 5.75e-09 | 1 |
carcinoma | 5.91e-07 | 106 |