FFCP PHASE1:Hg19::chr3:69812649..69812658,+: Difference between revisions
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|id=chr3:69812649..69812658,+
|short_description=p20@MITF
|description=CAGE_peak_20_at_MITF_5end
|association_with_transcript=-48bp_to_ENST00000472437,NM_001184967,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4286 | |EntrezGene=4286 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7105 | |HGNC=7105 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFN0,B4DJL2,O75030 | |UniProt=E9PFN0,B4DJL2,O75030 | ||
|association_with_transcript=-48bp_to_ENST00000472437,NM_001184967,uc011bgb.1_5end | |||
|cluster_id=chr3:69812649..69812658,+ | |||
|coexpression_cluster_id=C276 | |||
|description=CAGE_peak_20_at_MITF_5end | |||
|id=chr3:69812649..69812658,+ | |||
|ontology_enrichment_celltype=CL:1000497!5.67e-08!18;CL:0002518!5.67e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0002253;1.91e-15;2!CL:0002563;2.18e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,1.33e-15,2;CL:0002563,1.82e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0005795;2.66e-12;10 | |||
|ontology_enrichment_disease=DOID:0060084!8.91e-14!3;DOID:127!8.91e-14!3;DOID:0060072!1.94e-10!4 | |||
|ontology_enrichment_disease_v019=DOID:0060084;9.43e-11;3!DOID:127;9.43e-11;3!DOID:0060072;2.18e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.09e-10,3;DOID:127,1.09e-10,3;DOID:0060072,2.43e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0006554!6.17e-13!44;UBERON:0001008!1.38e-12!45;UBERON:0002113!6.18e-11!27;UBERON:0003918!6.18e-11!27;UBERON:0005095!6.18e-11!27;UBERON:0007687!6.18e-11!27;UBERON:0000489!5.70e-09!32;UBERON:0001046!3.11e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;2.05e-29;1!UBERON:0001052;2.18e-08;4!UBERON:0001242;2.18e-08;4!UBERON:0001262;2.18e-08;4!UBERON:0004786;2.18e-08;4!UBERON:0004808;2.18e-08;4!UBERON:0001277;2.18e-08;4!UBERON:0000995;1.25e-07;17!UBERON:0003975;2.95e-07;18!UBERON:0004907;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,1.78e-29,1;UBERON:0001052,1.82e-08,4;UBERON:0001242,1.82e-08,4;UBERON:0001262,1.82e-08,4;UBERON:0004786,1.82e-08,4;UBERON:0004808,1.82e-08,4;UBERON:0001277,1.82e-08,4;UBERON:0004907,5.08e-07,5 | |||
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| ||
|short_description=p20@MITF | |||
}} | }} |
Latest revision as of 12:09, 19 September 2015
Short description: | p20@MITF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_MITF_5end |
Coexpression cluster: | C276_mesothelioma_kidney_renal_small_clear_cerebellum_Renal |
Association with transcript: | -48bp_to_ENST00000472437, NM_001184967, uc011bgb.1_5end |
EntrezGene: | MITF |
HGNC: | 7105 |
UniProt: | E9PFN0B4DJL2O75030 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 1.33e-15 | 2 |
intestinal epithelial cell | 1.82e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
uterus or analog | 1.78e-29 | 1 |
rectum | 1.82e-08 | 4 |
intestinal mucosa | 1.82e-08 | 4 |
wall of intestine | 1.82e-08 | 4 |
gastrointestinal system mucosa | 1.82e-08 | 4 |
gastrointestinal system epithelium | 1.82e-08 | 4 |
intestinal epithelium | 1.82e-08 | 4 |
lower digestive tract | 5.08e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.09e-10 | 3 |
leiomyoma | 1.09e-10 | 3 |
benign neoplasm | 2.43e-08 | 4 |