FFCP PHASE1:Hg19::chr10:8100452..8100463,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2625 | |EntrezGene=2625 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4172 | |HGNC=4172 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=90bp_to_ENST00000461472_5end | |association_with_transcript=90bp_to_ENST00000461472_5end | ||
|cluster_id=chr10:8100452..8100463,+ | |||
|coexpression_cluster_id=C194 | |coexpression_cluster_id=C194 | ||
|description=CAGE_peak_20_at_GATA3_5end | |description=CAGE_peak_20_at_GATA3_5end | ||
|id=chr10:8100452..8100463,+ | |id=chr10:8100452..8100463,+ | ||
|ontology_enrichment_celltype=CL:0002541!1.06e-09!3;CL:0002231!1.61e-08!3;CL:0000039!9.32e-07!7;CL:0000586!9.32e-07!7 | |ontology_enrichment_celltype=CL:0002541!1.06e-09!3;CL:0002231!1.61e-08!3;CL:0000039!9.32e-07!7;CL:0000586!9.32e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.19e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.19e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!4.09e-12!4;DOID:1612!4.09e-12!4 | |ontology_enrichment_disease=DOID:5093!4.09e-12!4;DOID:1612!4.09e-12!4 | ||
|ontology_enrichment_disease_v019=DOID:5093;2.60e-56;4!DOID:1612;2.60e-56;4!DOID:299;1.13e-09;25!DOID:7;3.08e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.60e-56,4;DOID:1612,2.60e-56,4;DOID:7,1.26e-10,39;DOID:299,1.13e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0005631!4.03e-12!14;UBERON:0000158!4.03e-12!14;UBERON:0003124!2.33e-10!7;UBERON:0000476!1.06e-09!3;UBERON:0000920!1.06e-09!3;UBERON:0000478!4.08e-08!24;UBERON:0000310!3.41e-07!10 | |ontology_enrichment_uberon=UBERON:0005631!4.03e-12!14;UBERON:0000158!4.03e-12!14;UBERON:0003124!2.33e-10!7;UBERON:0000476!1.06e-09!3;UBERON:0000920!1.06e-09!3;UBERON:0000478!4.08e-08!24;UBERON:0000310!3.41e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;4.41e-23;10!UBERON:0001443;4.65e-21;11!UBERON:0005631;6.60e-11;10!UBERON:0000158;6.60e-11;10!UBERON:0003124;1.19e-09;3!UBERON:0000920;1.19e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,4.42e-23,10;UBERON:0001443,4.65e-21,11;UBERON:0000920,1.19e-09,3;UBERON:0005631,4.82e-08,14;UBERON:0000158,4.82e-08,14 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.334231370655521,0,0,0,0.128091319725675,0.130059347559878,0,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,5.53143078571493,4.29243081047436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.601519410909855,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48482340416319,0.307160702099232,0,0,0.111308705022906,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,1.5625665665114,0.0874599999961957,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.69169171316418,1.70539524378567,0.54323685961004,0.31900115973192,0.549585560411174,3.19820865611181,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0.177404740325278,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,1.90047751517155,0,0,0.0918948995348449,0,0,0,0,0,0,0,0.387533459016037,0.186224142887574,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p20@GATA3 | |short_description=p20@GATA3 | ||
}} | }} |
Latest revision as of 12:34, 19 September 2015
Short description: | p20@GATA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_GATA3_5end |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | 90bp_to_ENST00000461472_5end |
EntrezGene: | GATA3 |
HGNC: | 4172 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.19e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
breast | 4.42e-23 | 10 |
chest | 4.65e-21 | 11 |
egg chorion | 1.19e-09 | 3 |
extraembryonic membrane | 4.82e-08 | 14 |
membranous layer | 4.82e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.60e-56 | 4 |
breast cancer | 2.60e-56 | 4 |
disease of anatomical entity | 1.26e-10 | 39 |
adenocarcinoma | 1.13e-09 | 25 |