FFCP PHASE1:Hg19::chr5:102143765..102143784,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5066 | |EntrezGene=5066 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8596 | |HGNC=8596 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000509523_5end | |association_with_transcript=0bp_to_ENST00000509523_5end | ||
|cluster_id=chr5:102143765..102143784,+ | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_22_at_PAM_5end | |description=CAGE_peak_22_at_PAM_5end | ||
|id=chr5:102143765..102143784,+ | |id=chr5:102143765..102143784,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002553;1.30e-19;1!CL:0000167;1.88e-19;1!CL:0000164;1.88e-19;1!CL:0000502;1.88e-19;1!CL:0000172;1.88e-19;1!CL:0000173;1.88e-19;1!CL:0002253;2.85e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.30e-19,1;CL:0000167,1.88e-19,1;CL:0000164,1.88e-19,1;CL:0000502,1.88e-19,1;CL:0000172,1.88e-19,1;CL:0000173,1.88e-19,1;CL:0002351,1.88e-19,1;CL:0002253,2.99e-10,2 | |||
|ontology_enrichment_development_v019=CL:0002351;1.88e-19;1!UBERON:0006215;2.88e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;1.88e-19;1!DOID:3119;2.95e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.88e-19,1;DOID:3119,3.19e-12,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0003112;3.56e-19;1!UBERON:0011158;3.56e-19;1!UBERON:0003128;3.56e-19;1!UBERON:0001703;3.56e-19;1!UBERON:0002241;3.56e-19;1!UBERON:0000349;2.09e-15;5!UBERON:0001876;1.89e-10;2!UBERON:0001954;2.85e-10;2!UBERON:0002702;2.85e-10;2!UBERON:0003022;2.85e-10;2!UBERON:0002421;2.85e-10;2!UBERON:0002600;2.85e-10;2!UBERON:0002619;1.16e-07;22!UBERON:0001870;2.88e-07;3!UBERON:0000956;7.72e-07;25!UBERON:0000203;7.72e-07;25 | |||
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| ||
|short_description=p22@PAM | |short_description=p22@PAM | ||
}} | }} |
Latest revision as of 12:52, 19 September 2015
Short description: | p22@PAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_PAM_5end |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | 0bp_to_ENST00000509523_5end |
EntrezGene: | PAM |
HGNC: | 8596 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.30e-19 | 1 |
peptide hormone secreting cell | 1.88e-19 | 1 |
enteroendocrine cell | 1.88e-19 | 1 |
type D enteroendocrine cell | 1.88e-19 | 1 |
somatostatin secreting cell | 1.88e-19 | 1 |
pancreatic D cell | 1.88e-19 | 1 |
progenitor cell of endocrine pancreas | 1.88e-19 | 1 |
epithelial cell of large intestine | 2.99e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
olfactory region | 5.62e-19 | 1 |
primary subdivision of skull | 5.62e-19 | 1 |
cranium | 5.62e-19 | 1 |
neurocranium | 5.62e-19 | 1 |
chondrocranium | 5.62e-19 | 1 |
cartilaginous neurocranium | 5.62e-19 | 1 |
head paraxial mesoderm | 5.62e-19 | 1 |
limbic system | 1.88e-15 | 5 |
amygdala | 1.89e-10 | 2 |
middle frontal gyrus | 2.27e-10 | 2 |
Ammon's horn | 2.49e-10 | 2 |
lobe parts of cerebral cortex | 2.49e-10 | 2 |
hippocampal formation | 2.49e-10 | 2 |
limbic lobe | 2.49e-10 | 2 |
head mesenchyme | 3.58e-10 | 2 |
regional part of cerebral cortex | 1.06e-07 | 22 |
frontal cortex | 2.47e-07 | 3 |
cerebral cortex | 7.12e-07 | 25 |
pallium | 7.12e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.88e-19 | 1 |
gastrointestinal system cancer | 3.19e-12 | 14 |