FFCP PHASE1:Hg19::chr5:102201678..102201681,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5066 | |EntrezGene=5066 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8596 | |HGNC=8596 | ||
|TSSclassifier=strong | |||
|UniProt=P19021 | |UniProt=P19021 | ||
|association_with_transcript=-32bp_to_ENST00000304400_5end | |association_with_transcript=-32bp_to_ENST00000304400_5end | ||
|cluster_id=chr5:102201678..102201681,+ | |||
|description=CAGE_peak_10_at_PAM_5end | |description=CAGE_peak_10_at_PAM_5end | ||
|id=chr5:102201678..102201681,+ | |id=chr5:102201678..102201681,+ | ||
|ontology_enrichment_celltype=CL:0002620;6.63e-22;23!CL:0002334;1.11e-09;12!CL:0000057;5.06e-09;73!CL:1000306;1.16e-08;4!CL:0002547;1.16e-08;4 | |ontology_enrichment_celltype=CL:0000055!2.02e-22!180;CL:0000057!1.18e-18!75;CL:0002620!1.02e-12!23;CL:0002334!7.84e-08!12 | ||
| | |ontology_enrichment_celltype_v019=CL:0002620;6.63e-22;23!CL:0002334;1.11e-09;12!CL:0000057;5.06e-09;73!CL:1000306;1.16e-08;4!CL:0002547;1.16e-08;4 | ||
|ontology_enrichment_disease=DOID:3307;1.53e-07;2 | |ontology_enrichment_celltype_v019_2=CL:0000057,2.60e-23,76;CL:0002620,4.69e-22,23;CL:0002334,2.05e-09,12;CL:1000306,9.79e-09,4;CL:0002547,9.79e-09,4 | ||
|ontology_enrichment_uberon=UBERON:0000947;1.74e-14;21!UBERON:0010191;1.74e-14;21!UBERON:0004573;8.55e-14;33!UBERON:0004571;8.55e-14;33!UBERON:0001637;9.61e-10;42!UBERON:0003509;9.61e-10;42!UBERON:0004572;9.61e-10;42!UBERON:0002097;2.19e-09;41!UBERON:0004797;1.16e-08;4!UBERON:0000415;1.16e-08;4!UBERON:0007240;1.16e-08;4!UBERON:0005742;1.16e-08;4!UBERON:0005734;1.16e-08;4!UBERON:0004664;1.16e-08;4!UBERON:0004663;1.16e-08;4!UBERON:0002199;9.32e-08;46!UBERON:0002416;9.32e-08;46!UBERON:0007500;9.50e-07;56!UBERON:0001981;9.50e-07;56!UBERON:0004537;9.50e-07;56 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;1.53e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,4.87e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0004872!6.66e-12!84;UBERON:0001009!5.38e-10!113;UBERON:0004535!8.50e-09!110;UBERON:0002049!3.18e-08!79;UBERON:0007798!3.18e-08!79;UBERON:0000055!3.83e-08!69;UBERON:0001981!5.48e-08!60;UBERON:0007500!5.48e-08!60;UBERON:0004537!5.48e-08!60;UBERON:0006965!5.48e-08!60;UBERON:0007100!6.80e-08!27;UBERON:0001637!9.79e-08!42;UBERON:0003509!9.79e-08!42;UBERON:0004572!9.79e-08!42;UBERON:0004573!1.90e-07!33;UBERON:0004571!1.90e-07!33;UBERON:0002097!1.92e-07!40;UBERON:0002199!2.02e-07!45;UBERON:0002416!2.02e-07!45;UBERON:0000947!5.35e-07!21;UBERON:0010191!5.35e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000947;1.74e-14;21!UBERON:0010191;1.74e-14;21!UBERON:0004573;8.55e-14;33!UBERON:0004571;8.55e-14;33!UBERON:0001637;9.61e-10;42!UBERON:0003509;9.61e-10;42!UBERON:0004572;9.61e-10;42!UBERON:0002097;2.19e-09;41!UBERON:0004797;1.16e-08;4!UBERON:0000415;1.16e-08;4!UBERON:0007240;1.16e-08;4!UBERON:0005742;1.16e-08;4!UBERON:0005734;1.16e-08;4!UBERON:0004664;1.16e-08;4!UBERON:0004663;1.16e-08;4!UBERON:0002199;9.32e-08;46!UBERON:0002416;9.32e-08;46!UBERON:0007500;9.50e-07;56!UBERON:0001981;9.50e-07;56!UBERON:0004537;9.50e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000947,1.54e-14,21;UBERON:0010191,1.54e-14,21;UBERON:0004573,2.16e-14,33;UBERON:0004571,2.16e-14,33;UBERON:0002097,6.33e-13,41;UBERON:0001637,1.97e-12,42;UBERON:0003509,1.97e-12,42;UBERON:0004572,1.97e-12,42;UBERON:0004872,2.81e-11,83;UBERON:0002199,3.62e-11,46;UBERON:0002416,3.62e-11,46;UBERON:0007500,2.68e-09,59;UBERON:0001981,2.68e-09,59;UBERON:0004537,2.68e-09,59;UBERON:0006965,2.68e-09,59;UBERON:0000415,9.79e-09,4;UBERON:0007240,9.79e-09,4;UBERON:0005742,9.79e-09,4;UBERON:0005734,9.79e-09,4;UBERON:0004664,9.79e-09,4;UBERON:0004663,9.79e-09,4;UBERON:0004797,2.25e-08,7;UBERON:0001009,4.19e-08,112;UBERON:0000055,1.25e-07,68;UBERON:0004535,1.77e-07,109;UBERON:0007100,8.05e-07,27 | |||
|phase1_expression=0,0,0.422863212287913,0,0.893922188854576,0,0,0,0.783556884599516,0,0,0,0,0.74259811776028,0.662794751455832,1.34465029290355,0.602694528023977,2.19093027116212,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0.12786256184353,0.722878304769133,0,0.724232594804119,1.5905718941022,0.486634870302636,0.0945348171640679,0.221729397462564,0,0.130979075497713,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0.39752481473341,1.72046919021225,1.04142150482278,1.13061588384802,0,0,0.626984899610432,0.775250277507987,0.35576626268671,0,0.805658634218294,0,0.732186172644509,0,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0,1.49091585508596,0.633152558322899,1.58891016975863,5.73673241497627,2.12801029319014,2.24271040056923,0,1.2333377420858,0.933633106199299,0.538842688278752,0.653847612453835,0,0.576175924479999,0.468642863667593,0,0.570471821544449,0.597794722207204,0.587172493218824,1.13311061057692,1.12360645361799,0.204154171254893,0.122834317311768,0.206651562351531,0,0.741800787835671,0.910161361938026,0,0.336672227908132,0,0,0.877955241761676,0,1.05166641234618,0.113432183160021,3.22901344239952,0.213557388818567,0,2.40072876867522,0.824420233907511,0.772921620136887,1.67505170698431,1.5189869901714,1.75386609290158,1.51460264546469,0.460249493211497,1.13152239773168,8.87523981291536,1.30977727695932,1.18692414617341,0,0,0,0,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0,1.44375896333917,0,0.168584690078102,0.241011029883482,0.55146986366197,0.217879444092406,0,0,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0.469634776943287,0.144366447761074,0.462985512576611,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0.383382679165211,0,0.088048434013226,0.207328115540772,0.144119953416961,0.37872730027914,0.190493682876507,0.381988425558278,1.17217447210047,0,0,0,0,0.224262168690721,0.43596006883328,0.36669142910475,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.958499421966331,0,0,0.289562613335158,0.410952645100767,0.179060963239896,0,0.197030760201927,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0.535286966391485,0.315404830067869,0.35142424497814,0.300946099727719,0,0,0.664225598535437,0,0.955719759148911,0.195801157462741,0.343143423810856,0,0,0,0,0,0.30239029332968,1.48864684691266,0.920771839728375,1.12264037773229,1.02511319404561,2.04682899626681,0.804269605718038,1.48418066444991,0.308419387605311,0.177561725313127,0.164254312027618,2.07701771673448,0.813472649219715,0,0,0,0,0.182091168006717,0.393373244878272,0,0,0,0,0.105551628892876,0,0.340187410553031,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0,0.0915694648183434,0.330037999682352,0,0,0,0.386682873168488,0.308097234229289,0.307007349452259,0,0.214840489736547,0.145016693914229,0.255679882248303,0,0,0,0,0,0,1.88887408098384,0.6970372701606,0.308033580176089,0,4.34966496037536,0.18532421910392,0,0,0.316379424718726,0.38126038784765,0,0.42793898803392,0,1.56989728039846,0.539617372749944,0,0.353437207037059,0,0,0,0,0.487426979262569,1.05650146756755,0.682499557039929,0.424216295861138,1.13008116620243,1.10273068709225,0.66343897524122,0.876901770507525,0,0,0.202910376962704,0,0.281695602532241,0.286822704408103,0,0.35667105148125,0,0.844430541190656,0.987884678879706,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0.66614393599564,0,0.18714054040822,0,0.606802608747567,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0.276283915531148,0.251932747854276,0.102268682502155,0,0.311039587661807,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0.885741385813839,0,0,0,0.295547618953547,0.658156191461918,0,0,0.615602068030377,0.227884111694002,0,0.0897576444097721,0,0,0.274792780205587,0,0,0,0.498635045700469,0,0,0,0,0.158936578980379,0.210998064528027,0.326465616318295,0,0.216388639742091,0,0.265372693510018,0,0,0,0.104421949505455,0.202203398942031,1.60515529459758,0,0,0,0,0.789168805698781,0,0,0.189559738885464,0,0.103688191397247,0,0,0.627865836814451,0,0,0,0,0,0,0.873633341210151,0.171986032471617,0.19351266257817,0.0730893170861856,0.164230914106418,0.0969890164884194,0,0,0.548167698587004,0.397429223405979,0.126621591911757,0,0.0801588202515337,0,0,0,0.343609788497747,0.171594997861965,0,0,0,0.407712618220842,0.313808538937,0.203996435272644,0.288950589901519,0,0,1.27746588066972,0,0,1.67569440763353,0.229160424011684,0,0.998395002494955,1.71690419254628,0.892685829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| ||
|short_description=p10@PAM | |short_description=p10@PAM | ||
}} | }} |
Latest revision as of 13:02, 19 September 2015
Short description: | p10@PAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PAM_5end |
Coexpression cluster: | NA |
Association with transcript: | -32bp_to_ENST00000304400_5end |
EntrezGene: | PAM |
HGNC: | 8596 |
UniProt: | P19021 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.60e-23 | 76 |
skin fibroblast | 4.69e-22 | 23 |
preadipocyte | 2.05e-09 | 12 |
fibroblast of tunica adventitia of artery | 9.79e-09 | 4 |
fibroblast of the aortic adventitia | 9.79e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
aorta | 1.54e-14 | 21 |
aortic system | 1.54e-14 | 21 |
systemic artery | 2.16e-14 | 33 |
systemic arterial system | 2.16e-14 | 33 |
skin of body | 6.33e-13 | 41 |
artery | 1.97e-12 | 42 |
arterial blood vessel | 1.97e-12 | 42 |
arterial system | 1.97e-12 | 42 |
splanchnic layer of lateral plate mesoderm | 2.81e-11 | 83 |
integument | 3.62e-11 | 46 |
integumental system | 3.62e-11 | 46 |
epithelial tube open at both ends | 2.68e-09 | 59 |
blood vessel | 2.68e-09 | 59 |
blood vasculature | 2.68e-09 | 59 |
vascular cord | 2.68e-09 | 59 |
artery wall | 9.79e-09 | 4 |
tunica adventitia of artery | 9.79e-09 | 4 |
adventitia | 9.79e-09 | 4 |
tunica adventitia of blood vessel | 9.79e-09 | 4 |
aorta tunica adventitia | 9.79e-09 | 4 |
aorta wall | 9.79e-09 | 4 |
blood vessel layer | 2.25e-08 | 7 |
circulatory system | 4.19e-08 | 112 |
vessel | 1.25e-07 | 68 |
cardiovascular system | 1.77e-07 | 109 |
primary circulatory organ | 8.05e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
teratoma | 4.87e-08 | 2 |