FFCP PHASE1:Hg19::chr2:202222091..202222111,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:202222091..202222111,- to FFCP PHASE1:Hg19::chr2:202222091..202222111,-: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=130540 | |EntrezGene=130540 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14439 | |HGNC=14439 | ||
|TSSclassifier=strong | |||
|UniProt=G5E9S3,Q96Q35,Q8N1B6 | |UniProt=G5E9S3,Q96Q35,Q8N1B6 | ||
|association_with_transcript=0bp_to_ENST00000392257,ENST00000405148,NM_001127391,NM_139163,uc002uya.3,uc010ftg.2,uc010fth.2_5end | |||
|cluster_id=chr2:202222091..202222111,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_ALS2CR12_5end | |||
|id=chr2:202222091..202222111,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.07e-17;2!UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.79e-31!115;UBERON:0001049!1.40e-29!57;UBERON:0005068!1.40e-29!57;UBERON:0006241!1.40e-29!57;UBERON:0007135!1.40e-29!57;UBERON:0002616!2.66e-25!59;UBERON:0002020!2.34e-23!34;UBERON:0003528!2.34e-23!34;UBERON:0000955!2.72e-23!69;UBERON:0006238!2.72e-23!69;UBERON:0001893!2.84e-23!34;UBERON:0001017!2.29e-21!82;UBERON:0001869!5.81e-21!32;UBERON:0002791!1.75e-20!33;UBERON:0005743!3.38e-20!86;UBERON:0002780!5.94e-19!41;UBERON:0001890!5.94e-19!41;UBERON:0006240!5.94e-19!41;UBERON:0003080!1.89e-18!42;UBERON:0003075!2.47e-18!86;UBERON:0007284!2.47e-18!86;UBERON:0000073!6.42e-18!94;UBERON:0001016!6.42e-18!94;UBERON:0001896!1.79e-17!3;UBERON:0005290!1.79e-17!3;UBERON:0010096!1.79e-17!3;UBERON:0001872!2.07e-17!5;UBERON:0002346!2.41e-17!90;UBERON:0002298!2.98e-17!8;UBERON:0002308!2.30e-15!9;UBERON:0000125!2.30e-15!9;UBERON:0002619!1.42e-13!22;UBERON:0000369!2.61e-13!4;UBERON:0002435!2.61e-13!4;UBERON:0000204!2.61e-13!4;UBERON:0010082!2.61e-13!4;UBERON:0003076!7.80e-13!15;UBERON:0003057!7.80e-13!15;UBERON:0001873!1.36e-12!2;UBERON:0010122!1.36e-12!2;UBERON:0003127!2.68e-12!2;UBERON:0000153!3.76e-12!129;UBERON:0007811!3.76e-12!129;UBERON:0002148!5.23e-12!2;UBERON:0009662!5.23e-12!2;UBERON:0003056!5.42e-12!61;UBERON:0000956!7.12e-12!25;UBERON:0000203!7.12e-12!25;UBERON:0001950!1.54e-11!20;UBERON:0000033!1.86e-11!123;UBERON:0004733!2.00e-11!12;UBERON:0002028!2.00e-11!12;UBERON:0007277!2.00e-11!12;UBERON:0000025!5.62e-11!194;UBERON:0004732!1.58e-10!13;UBERON:0000349!3.74e-10!5;UBERON:0002420!4.47e-10!9;UBERON:0007245!4.47e-10!9;UBERON:0010009!4.47e-10!9;UBERON:0010011!4.47e-10!9;UBERON:0000454!4.47e-10!9;UBERON:0005383!1.13e-08!3;UBERON:0005382!1.13e-08!3;UBERON:0000988!2.74e-08!3;UBERON:0006331!2.74e-08!3;UBERON:0004121!3.00e-08!169;UBERON:0000924!5.74e-08!173;UBERON:0006601!5.74e-08!173;UBERON:0004111!7.27e-08!241;UBERON:0009663!8.50e-08!7;UBERON:0002171!4.69e-07!1;UBERON:0006518!4.69e-07!1;UBERON:0008949!4.69e-07!1;UBERON:0000101!4.69e-07!1;UBERON:0002167!4.69e-07!1;UBERON:0002336!4.97e-07!1;UBERON:0001018!4.97e-07!1;UBERON:0002473!4.97e-07!1;UBERON:0005340!4.97e-07!1;UBERON:0002316!4.97e-07!1;UBERON:0003544!4.97e-07!1;UBERON:0001020!4.97e-07!1;UBERON:0005970!4.97e-07!1;UBERON:0002437!4.97e-07!1;UBERON:0001301!7.82e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.07e-17;2!UBERON:0001873;1.07e-17;2!UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0005383;2.89e-12;3!UBERON:0005382;2.89e-12;3!UBERON:0000369;1.57e-09;4!UBERON:0002435;1.57e-09;4!UBERON:0000204;1.57e-09;4!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,9.07e-18,2;UBERON:0010122,9.07e-18,2;UBERON:0003127,1.07e-17,2;UBERON:0000473,1.22e-17,8;UBERON:0003135,4.00e-13,11;UBERON:0005383,2.59e-12,3;UBERON:0005382,2.59e-12,3;UBERON:0000369,1.44e-09,4;UBERON:0002435,1.44e-09,4;UBERON:0000204,1.44e-09,4;UBERON:0010082,1.44e-09,4;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66741411393595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.996239941255349,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.844175070377856,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.67401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.39669780522807,0,0,0.213574825135389,1.25763444079733,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.554645257684261,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,5.45606627171324,9.11078042531007,0,0,0.426467963801962,0,0,0,0,0,0,0,0,0,1.36272190246085,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66741411393595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.996239941255349,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.844175070377856,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.67401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.39669780522807,0,0,0.213574825135389,1.25763444079733,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.554645257684261,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,5.45606627171324,9.11078042531007,0,0,0.426467963801962,0,0,0,0,0,0,0,0,0,1.36272190246085,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@ALS2CR12 | |||
}} | }} |
Latest revision as of 13:09, 19 September 2015
Short description: | p2@ALS2CR12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ALS2CR12_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000392257, ENST00000405148, NM_001127391, NM_139163, uc002uya.3, uc010ftg.2, uc010fth.2_5end |
EntrezGene: | ALS2CR12 |
HGNC: | 14439 |
UniProt: | G5E9S3Q96Q35Q8N1B6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 9.07e-18 | 2 |
future caudate nucleus | 9.07e-18 | 2 |
open tracheal system trachea | 1.07e-17 | 2 |
testis | 1.22e-17 | 8 |
male reproductive organ | 4.00e-13 | 11 |
caudate-putamen | 2.59e-12 | 3 |
dorsal striatum | 2.59e-12 | 3 |
corpus striatum | 1.44e-09 | 4 |
striatum | 1.44e-09 | 4 |
ventral part of telencephalon | 1.44e-09 | 4 |
future corpus striatum | 1.44e-09 | 4 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |