FFCP PHASE1:Hg19::chr2:202508269..202508315,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65062 | |EntrezGene=65062 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14432 | |HGNC=14432 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z329 | |UniProt=F2Z329 | ||
|association_with_transcript=0bp_to_ENST00000432684_5end | |association_with_transcript=0bp_to_ENST00000432684_5end | ||
|cluster_id=chr2:202508269..202508315,- | |||
|description=CAGE_peak_3_at_TMEM237_5end | |description=CAGE_peak_3_at_TMEM237_5end | ||
|id=chr2:202508269..202508315,- | |id=chr2:202508269..202508315,- | ||
|ontology_enrichment_celltype=CL:0000220!6.25e-21!246;CL:0002321!1.08e-20!248;CL:0000055!8.59e-15!180;CL:0002076!1.65e-11!43;CL:0000066!3.55e-11!254;CL:0000359!4.56e-11!32;CL:0000192!1.04e-10!42;CL:0000514!1.04e-10!42;CL:0000223!1.10e-09!59;CL:0000187!7.85e-09!54;CL:0000680!2.07e-08!57;CL:0000056!2.07e-08!57;CL:0000355!2.07e-08!57;CL:0000076!2.65e-08!62;CL:0000393!3.99e-08!60;CL:0000211!3.99e-08!60;CL:0000183!4.86e-08!59;CL:0002368!4.75e-07!13 | |ontology_enrichment_celltype=CL:0000220!6.25e-21!246;CL:0002321!1.08e-20!248;CL:0000055!8.59e-15!180;CL:0002076!1.65e-11!43;CL:0000066!3.55e-11!254;CL:0000359!4.56e-11!32;CL:0000192!1.04e-10!42;CL:0000514!1.04e-10!42;CL:0000223!1.10e-09!59;CL:0000187!7.85e-09!54;CL:0000680!2.07e-08!57;CL:0000056!2.07e-08!57;CL:0000355!2.07e-08!57;CL:0000076!2.65e-08!62;CL:0000393!3.99e-08!60;CL:0000211!3.99e-08!60;CL:0000183!4.86e-08!59;CL:0002368!4.75e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.78e-11;32!CL:0002076;7.05e-11;42!CL:0002159;3.71e-09;14!CL:0002368;1.98e-08;13!CL:0002539;4.15e-08;10!CL:0000192;1.05e-07;43!CL:0002251;5.72e-07;20!CL:0000197;8.05e-07;6!CL:0000098;8.05e-07;6!CL:0002167;8.05e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.22e-14,250;CL:0002076,6.89e-14,42;CL:0000359,4.20e-12,32;CL:0000192,1.22e-10,43;CL:0000514,1.22e-10,43;CL:0000223,2.27e-10,58;CL:0002159,2.71e-09,14;CL:0002539,1.72e-08,10;CL:0002368,2.52e-08,13;CL:0000187,5.73e-08,55;CL:0000680,1.34e-07,58;CL:0000056,1.34e-07,58;CL:0000355,1.34e-07,58;CL:0000066,2.66e-07,253;CL:0002251,4.01e-07,20;CL:0000393,5.91e-07,61;CL:0000211,5.91e-07,61;CL:0000076,7.53e-07,63;CL:0000197,8.33e-07,6;CL:0000098,8.33e-07,6;CL:0002167,8.33e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;1.05e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1749;1.37e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,7.40e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!3.17e-15!365;UBERON:0000468!9.22e-12!659;UBERON:0003102!1.18e-11!95;UBERON:0001637!3.60e-10!42;UBERON:0003509!3.60e-10!42;UBERON:0004572!3.60e-10!42;UBERON:0000480!3.99e-10!626;UBERON:0000486!4.31e-10!82;UBERON:0002100!4.85e-10!216;UBERON:0000467!5.50e-10!625;UBERON:0000055!2.58e-09!69;UBERON:0000914!2.88e-09!83;UBERON:0002329!2.88e-09!83;UBERON:0003077!2.88e-09!83;UBERON:0003059!2.88e-09!83;UBERON:0007282!2.88e-09!83;UBERON:0009618!2.88e-09!83;UBERON:0007285!2.88e-09!83;UBERON:0002049!6.86e-09!79;UBERON:0007798!6.86e-09!79;UBERON:0001981!1.42e-08!60;UBERON:0007500!1.42e-08!60;UBERON:0004537!1.42e-08!60;UBERON:0006965!1.42e-08!60;UBERON:0004872!2.33e-08!84;UBERON:0001134!2.96e-08!61;UBERON:0002036!2.96e-08!61;UBERON:0003082!2.96e-08!61;UBERON:0004573!3.00e-08!33;UBERON:0004571!3.00e-08!33;UBERON:0004119!5.09e-08!169;UBERON:0000925!5.09e-08!169;UBERON:0006595!5.09e-08!169;UBERON:0000490!8.40e-08!138;UBERON:0002385!1.28e-07!63;UBERON:0001015!1.28e-07!63;UBERON:0000383!1.28e-07!63;UBERON:0003104!3.54e-07!238;UBERON:0009142!3.54e-07!238;UBERON:0004290!5.05e-07!70;UBERON:0000481!7.07e-07!347;UBERON:0000119!8.89e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.72e-08;33!UBERON:0004571;1.72e-08;33!UBERON:0004237;4.15e-08;10!UBERON:0004695;4.15e-08;10!UBERON:0002111;4.15e-08;10!UBERON:0004178;4.15e-08;10!UBERON:0001637;8.01e-08;42!UBERON:0003509;8.01e-08;42!UBERON:0004572;8.01e-08;42!UBERON:0001135;2.50e-07;15!UBERON:0000165;6.73e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,6.55e-15,99;UBERON:0001637,4.64e-11,42;UBERON:0003509,4.64e-11,42;UBERON:0004572,4.64e-11,42;UBERON:0004573,8.96e-10,33;UBERON:0004571,8.96e-10,33;UBERON:0000486,7.70e-09,83;UBERON:0004237,1.72e-08,10;UBERON:0004695,1.72e-08,10;UBERON:0002111,1.72e-08,10;UBERON:0004178,1.72e-08,10;UBERON:0001135,1.38e-07,15;UBERON:0000165,1.76e-07,29;UBERON:0000930,1.76e-07,29;UBERON:0001134,4.62e-07,62;UBERON:0002036,4.62e-07,62;UBERON:0003082,4.62e-07,62;UBERON:0007500,5.04e-07,59;UBERON:0001981,5.04e-07,59;UBERON:0004537,5.04e-07,59;UBERON:0006965,5.04e-07,59 | |||
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| ||
|short_description=p3@TMEM237 | |short_description=p3@TMEM237 | ||
}} | }} |
Latest revision as of 13:35, 19 September 2015
Short description: | p3@TMEM237 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEM237_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000432684_5end |
EntrezGene: | TMEM237 |
HGNC: | 14432 |
UniProt: | F2Z329 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.22e-14 | 250 |
endo-epithelial cell | 6.89e-14 | 42 |
vascular associated smooth muscle cell | 4.20e-12 | 32 |
smooth muscle cell | 1.22e-10 | 43 |
smooth muscle myoblast | 1.22e-10 | 43 |
endodermal cell | 2.27e-10 | 58 |
general ecto-epithelial cell | 2.71e-09 | 14 |
aortic smooth muscle cell | 1.72e-08 | 10 |
respiratory epithelial cell | 2.52e-08 | 13 |
muscle cell | 5.73e-08 | 55 |
muscle precursor cell | 1.34e-07 | 58 |
myoblast | 1.34e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.34e-07 | 58 |
epithelial cell | 2.66e-07 | 253 |
epithelial cell of alimentary canal | 4.01e-07 | 20 |
electrically responsive cell | 5.91e-07 | 61 |
electrically active cell | 5.91e-07 | 61 |
squamous epithelial cell | 7.53e-07 | 63 |
receptor cell | 8.33e-07 | 6 |
sensory epithelial cell | 8.33e-07 | 6 |
olfactory epithelial cell | 8.33e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
surface structure | 6.55e-15 | 99 |
artery | 4.64e-11 | 42 |
arterial blood vessel | 4.64e-11 | 42 |
arterial system | 4.64e-11 | 42 |
systemic artery | 8.96e-10 | 33 |
systemic arterial system | 8.96e-10 | 33 |
multilaminar epithelium | 7.70e-09 | 83 |
blood vessel smooth muscle | 1.72e-08 | 10 |
arterial system smooth muscle | 1.72e-08 | 10 |
artery smooth muscle tissue | 1.72e-08 | 10 |
aorta smooth muscle tissue | 1.72e-08 | 10 |
smooth muscle tissue | 1.38e-07 | 15 |
mouth | 1.76e-07 | 29 |
stomodeum | 1.76e-07 | 29 |
skeletal muscle tissue | 4.62e-07 | 62 |
striated muscle tissue | 4.62e-07 | 62 |
myotome | 4.62e-07 | 62 |
epithelial tube open at both ends | 5.04e-07 | 59 |
blood vessel | 5.04e-07 | 59 |
blood vasculature | 5.04e-07 | 59 |
vascular cord | 5.04e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 7.40e-09 | 14 |