FFCP PHASE1:Hg19::chr19:51504852..51504866,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:51504852..51504866,- to FFCP PHASE1:Hg19::chr19:51504852..51504866,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11202 | |EntrezGene=11202 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6369 | |HGNC=6369 | ||
|TSSclassifier=strong | |||
|UniProt=O60259 | |UniProt=O60259 | ||
|association_with_transcript=91bp_to_ENST00000291726,ENST00000320838,ENST00000347619,ENST00000391806,NM_007196,NM_144505,NM_144506,NM_144507_5end | |||
|cluster_id=chr19:51504852..51504866,- | |||
|description=CAGE_peak_1_at_KLK8_5end | |||
|id=chr19:51504852..51504866,- | |||
|ontology_enrichment_celltype=CL:0002076!8.83e-24!43;CL:0000066!9.82e-20!254;CL:0000223!1.69e-18!59;CL:0002251!1.35e-12!21;CL:0002159!6.26e-11!13;CL:0002368!8.63e-11!13;CL:0002077!9.21e-09!33;CL:0000039!8.35e-08!7;CL:0000586!8.35e-08!7;CL:0000622!1.11e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002076;8.24e-18;42!CL:0002159;1.64e-17;14!CL:0002251;5.31e-16;20!CL:0002077;9.79e-09;34!CL:0000622;1.07e-08;5!CL:0002621;1.40e-08;3!CL:0002166;1.97e-08;3!CL:0002368;7.21e-08;13!CL:0000362;2.71e-07;9!CL:0000154;3.09e-07;6!CL:0000240;5.09e-07;6!CL:0000311;5.09e-07;6!CL:0000079;5.09e-07;6!CL:0000237;5.09e-07;6!CL:0000575;6.12e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.44e-23,42;CL:0000066,9.75e-20,253;CL:0000223,1.83e-18,58;CL:0002159,1.63e-17,14;CL:0002251,5.13e-16,20;CL:0002077,2.69e-10,34;CL:0000622,1.04e-08,5;CL:0002621,1.45e-08,3;CL:0002166,1.83e-08,3;CL:0002368,7.17e-08,13;CL:0000076,7.53e-08,63;CL:0000362,2.81e-07,9;CL:0000154,3.02e-07,6;CL:0000240,5.99e-07,6;CL:0000311,5.99e-07,6;CL:0000079,5.99e-07,6;CL:0000237,5.99e-07,6;CL:0000036,5.99e-07,6;CL:0000357,5.99e-07,6;CL:0000114,5.99e-07,6;CL:0000575,6.12e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000223;1.13e-09;58!CL:0000357;5.09e-07;6!CL:0000114;5.09e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!6.97e-11!14;DOID:305!1.61e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.36e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.83e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!5.08e-12!72;UBERON:0000166!2.58e-11!21;UBERON:0004119!9.51e-11!169;UBERON:0000925!9.51e-11!169;UBERON:0006595!9.51e-11!169;UBERON:0000464!1.67e-10!104;UBERON:0000161!3.56e-09!35;UBERON:0000165!1.16e-08!28;UBERON:0000930!1.16e-08!28;UBERON:0003729!4.77e-08!5;UBERON:0001007!5.27e-08!155;UBERON:0001555!5.27e-08!155;UBERON:0007026!5.27e-08!155;UBERON:0000065!1.47e-07!53;UBERON:0000466!1.72e-07!126;UBERON:0000062!2.72e-07!511;UBERON:0003343!4.90e-07!4;UBERON:0004785!4.90e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;7.35e-13;28!UBERON:0000161;6.04e-12;19!UBERON:0000166;6.04e-12;19!UBERON:0003729;1.12e-11;13!UBERON:0003343;3.44e-11;4!UBERON:0004785;3.44e-11;4!UBERON:0000974;4.90e-11;6!UBERON:0000344;5.31e-11;20!UBERON:0001723;1.15e-08;3!UBERON:0001033;1.15e-08;3!UBERON:0001949;1.40e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,7.99e-15,22;UBERON:0000165,2.71e-12,29;UBERON:0000930,2.71e-12,29;UBERON:0003102,3.14e-12,99;UBERON:0003729,1.22e-11,13;UBERON:0003343,3.18e-11,4;UBERON:0004785,3.18e-11,4;UBERON:0000161,3.40e-11,36;UBERON:0000344,5.73e-11,20;UBERON:0001004,8.18e-11,74;UBERON:0000033,1.13e-10,56;UBERON:0000153,2.07e-10,62;UBERON:0007811,2.07e-10,62;UBERON:0001723,1.06e-08,3;UBERON:0001033,1.06e-08,3;UBERON:0010056,1.06e-08,3;UBERON:0001949,1.45e-08,3;UBERON:0001444,1.53e-08,49;UBERON:0004119,7.63e-08,160;UBERON:0000925,7.63e-08,160;UBERON:0006595,7.63e-08,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,1.8072355126695,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,42.2582534419349,43.3817798057782,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.0603263985566,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8226077771446,4.36393792945335,18.0686895095072,0.121973706129595,0,0.232387885739037,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.255289671799,16.8602629886429,5.32803553781643,1.01847289674383,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,10.3107217385455,5.87937448696008,5.81277898693785,2.68675568108545,3.77824120068151,23.3863434290779,0,0,0,0.288239906833923,0.12624243342638,0.126995788584338,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.42127175273796,40.0552301871149,0,0,0,9.02399225814824,2.92658280996776,0,0,0.105551628892876,0,0,0,0,0,0,3.05851527654046,1.66215201785745,0.223874754722178,0,0,0,0,0,0,0,0,12.0595762979196,20.1518676271322,0,0,0,0,0,0,0,0,0,4.62797763010739,0.960950336825531,0.893288987462089,3.74283789165535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63577591633371,0.670302275535787,1.08890984861323,0,0.43050537267123,0,10.6423236848802,1.83778720165568,0,0,0,0,0,0,0,0,0,0.962479855263359,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.8839631306857,5.64232893582013,40.8523733791979,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,2.89999830173917,0,1.5255219017566,18.9110145414349,0,0,0,0,0,0,0.331737779793674,1.47773809476774,0.219385397153973,0,44.8944456577103,4.23226421770884,0,0.23056390438806,0.179515288819544,3.47671590150426,2.23300811812344,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,4.89698424477443,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,2.15231080825299,0.971121518136371,0,0,0,0.63186579628488,0,0,0,0,0,0,0,0.138674673013139,0.520679215005393,41.7447612985249,0.34823682632161,0.34945333648406,0,0,0,0,40.5414088921593,0,0.225980740780532,0,0,0,34.8081461267949,0.721429382263803,0,1.9980960958213,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,1.19807400299395,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0.2249738915515,25.5354645004123,0,39.2458584491141,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.3251905802335,0,0,0,0,0,0,17.2352139597949,0,0,0,0,0,0,0,0.1251909307065,0,0.443716206147409,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,1.54400723580486,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,2.53574548030352,0,0,0,0,0,55.6720440723389,6.8428498603627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.7257695343733,5.66254672069154,59.7977231180674,3.9278726491115,0,0,0,0.601682626794058,0.20170506870352,0,5.50004058410987,0,27.2055198639363,0,0,0,0,0,0,2.97726707033577,0,0.255524855279191,0,0,1.21393120847326,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,1.65772931330429,0.3414369541879,29.0329057961919,0.430227358820278,0,0,0,22.2233662487729,0,0,8.7247236802278,0.883352102537187,0.365753774946808,0,0,0,4.85710993059139,0,0,0,0,0,0,0,0,0,0,0,0.785233868459781,0,0,0,0.187967835959707,0.128915775947154,0,14.4628690270583,1.76447435857846,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.815910637935854,0.534434810531121,0.18378979906969,0.250707539292375,0.0757786982182394,0,0,0,4.4779136199206,0,0.322944549180031,0.434523000071005,0,0.12729431655633,0.404234377916439,38.9712978735561,12.3203988390701,9.83339974012978,3.01233262649241,0.332660356546013,0,0,0,0,0,0.611207220914332,9.76550827957772,0,0.201273793591026,0 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| ||
|short_description=p1@KLK8 | |||
}} | }} |
Latest revision as of 13:41, 19 September 2015
Short description: | p1@KLK8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KLK8_5end |
Coexpression cluster: | NA |
Association with transcript: | 91bp_to_ENST00000291726, ENST00000320838, ENST00000347619, ENST00000391806, NM_007196, NM_144505, NM_144506, NM_144507_5end |
EntrezGene: | KLK8 |
HGNC: | 6369 |
UniProt: | O60259 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.44e-23 | 42 |
epithelial cell | 9.75e-20 | 253 |
endodermal cell | 1.83e-18 | 58 |
general ecto-epithelial cell | 1.63e-17 | 14 |
epithelial cell of alimentary canal | 5.13e-16 | 20 |
ecto-epithelial cell | 2.69e-10 | 34 |
acinar cell | 1.04e-08 | 5 |
gingival epithelial cell | 1.45e-08 | 3 |
epithelial cell of Malassez | 1.83e-08 | 3 |
respiratory epithelial cell | 7.17e-08 | 13 |
squamous epithelial cell | 7.53e-08 | 63 |
epidermal cell | 2.81e-07 | 9 |
protein secreting cell | 3.02e-07 | 6 |
stratified squamous epithelial cell | 5.99e-07 | 6 |
keratin accumulating cell | 5.99e-07 | 6 |
stratified epithelial cell | 5.99e-07 | 6 |
keratinizing barrier epithelial cell | 5.99e-07 | 6 |
epithelial fate stem cell | 5.99e-07 | 6 |
stratified epithelial stem cell | 5.99e-07 | 6 |
surface ectodermal cell | 5.99e-07 | 6 |
corneal epithelial cell | 6.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
oral opening | 7.99e-15 | 22 |
mouth | 2.71e-12 | 29 |
stomodeum | 2.71e-12 | 29 |
surface structure | 3.14e-12 | 99 |
mouth mucosa | 1.22e-11 | 13 |
mucosa of oral region | 3.18e-11 | 4 |
respiratory system mucosa | 3.18e-11 | 4 |
orifice | 3.40e-11 | 36 |
mucosa | 5.73e-11 | 20 |
respiratory system | 8.18e-11 | 74 |
head | 1.13e-10 | 56 |
anterior region of body | 2.07e-10 | 62 |
craniocervical region | 2.07e-10 | 62 |
tongue | 1.06e-08 | 3 |
gustatory system | 1.06e-08 | 3 |
future tongue | 1.06e-08 | 3 |
gingival epithelium | 1.45e-08 | 3 |
subdivision of head | 1.53e-08 | 49 |
endoderm-derived structure | 7.63e-08 | 160 |
endoderm | 7.63e-08 | 160 |
presumptive endoderm | 7.63e-08 | 160 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.83e-11 | 14 |