FFCP PHASE2:Hg19::chr19:51628390..51628400,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:27180 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:10878 |TSScla...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=27180 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=10878 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 14:15, 19 September 2015
Short description: | p4@SIGLEC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SIGLEC9_5end |
Coexpression cluster: | C847_Monocytederived_CD14_Macrophage_Dendritic_immature_adipose_lung |
Association with transcript: | 86bp_to_DQ892476, DQ895688_5end |
EntrezGene: | SIGLEC9 |
HGNC: | 10878 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@SIGLEC9 |
---|
0
1
2
3
4
5
6
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.58e-77 | 48 |
phagocyte | 3.58e-77 | 48 |
monopoietic cell | 5.29e-73 | 59 |
monocyte | 5.29e-73 | 59 |
monoblast | 5.29e-73 | 59 |
promonocyte | 5.29e-73 | 59 |
macrophage dendritic cell progenitor | 1.54e-70 | 61 |
myeloid lineage restricted progenitor cell | 5.12e-65 | 66 |
granulocyte monocyte progenitor cell | 5.20e-64 | 67 |
myeloid leukocyte | 2.17e-59 | 72 |
Showing 1 to 10 of 28 entries
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.00e-56 | 76 |
bone element | 8.17e-52 | 82 |
skeletal element | 5.97e-47 | 90 |
immune system | 2.44e-45 | 93 |
hematopoietic system | 7.17e-43 | 98 |
blood island | 7.17e-43 | 98 |
skeletal system | 5.96e-42 | 100 |
hemolymphoid system | 1.30e-38 | 108 |
musculoskeletal system | 9.00e-24 | 167 |
lateral plate mesoderm | 7.95e-21 | 203 |
Showing 1 to 10 of 19 entries