FFCP PHASE1:Hg19::chr1:86934602..86934620,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1179 | |EntrezGene=1179 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2015 | |HGNC=2015 | ||
|TSSclassifier=strong | |||
|UniProt=F5H5S5 | |UniProt=F5H5S5 | ||
|association_with_transcript=0bp_to_ENST00000495894,ENST00000539889_5end | |association_with_transcript=0bp_to_ENST00000495894,ENST00000539889_5end | ||
|cluster_id=chr1:86934602..86934620,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_1_at_CLCA1_5end | |description=CAGE_peak_1_at_CLCA1_5end | ||
|id=chr1:86934602..86934620,+ | |id=chr1:86934602..86934620,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;4.23e-13;1!UBERON:0006242;4.77e-13;1!UBERON:0000358;5.38e-13;1 | |||
|ontology_enrichment_disease=DOID:178!8.51e-08!1;DOID:326!8.51e-08!1;DOID:3978!8.51e-08!1;DOID:3394!8.51e-08!1;DOID:5844!8.51e-08!1;DOID:8552!1.04e-07!1 | |ontology_enrichment_disease=DOID:178!8.51e-08!1;DOID:326!8.51e-08!1;DOID:3978!8.51e-08!1;DOID:3394!8.51e-08!1;DOID:5844!8.51e-08!1;DOID:8552!1.04e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.52e-20!35;UBERON:0000160!5.62e-18!27;UBERON:0000059!3.34e-15!11;UBERON:0001155!2.81e-12!9;UBERON:0004921!2.46e-08!129;UBERON:0004185!2.46e-08!129;UBERON:0001154!4.66e-08!1;UBERON:0001153!4.66e-08!1;UBERON:0007029!7.97e-08!1;UBERON:0002171!9.10e-08!1;UBERON:0006518!9.10e-08!1;UBERON:0008949!9.10e-08!1;UBERON:0000101!9.10e-08!1;UBERON:0002167!9.10e-08!1;UBERON:0002363!1.35e-07!1;UBERON:0007647!1.35e-07!1;UBERON:0010115!1.35e-07!1;UBERON:0001007!1.55e-07!155;UBERON:0001555!1.55e-07!155;UBERON:0007026!1.55e-07!155;UBERON:0002022!1.87e-07!1;UBERON:0007023!5.69e-07!115 | |ontology_enrichment_uberon=UBERON:0005409!2.52e-20!35;UBERON:0000160!5.62e-18!27;UBERON:0000059!3.34e-15!11;UBERON:0001155!2.81e-12!9;UBERON:0004921!2.46e-08!129;UBERON:0004185!2.46e-08!129;UBERON:0001154!4.66e-08!1;UBERON:0001153!4.66e-08!1;UBERON:0007029!7.97e-08!1;UBERON:0002171!9.10e-08!1;UBERON:0006518!9.10e-08!1;UBERON:0008949!9.10e-08!1;UBERON:0000101!9.10e-08!1;UBERON:0002167!9.10e-08!1;UBERON:0002363!1.35e-07!1;UBERON:0007647!1.35e-07!1;UBERON:0010115!1.35e-07!1;UBERON:0001007!1.55e-07!155;UBERON:0001555!1.55e-07!155;UBERON:0007026!1.55e-07!155;UBERON:0002022!1.87e-07!1;UBERON:0007023!5.69e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.92e-41;17!UBERON:0005409;1.70e-40;22!UBERON:0000059;9.09e-27;11!UBERON:0004921;3.46e-25;33!UBERON:0002108;3.10e-22;4!UBERON:0001155;2.22e-21;9!UBERON:0001154;4.23e-13;1!UBERON:0001153;4.23e-13;1!UBERON:0009854;4.23e-13;1!UBERON:0007029;1.03e-12;1!UBERON:0000922;6.09e-11;49!UBERON:0001555;1.11e-10;54!UBERON:0004907;2.71e-10;5!UBERON:0001007;7.03e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.92e-41,17;UBERON:0005409,1.01e-35,25;UBERON:0000059,9.09e-27,11;UBERON:0002108,3.10e-22,4;UBERON:0001155,2.22e-21,9;UBERON:0001154,4.23e-13,1;UBERON:0001153,4.23e-13,1;UBERON:0001045,4.23e-13,1;UBERON:0007029,1.09e-12,1;UBERON:0004907,2.71e-10,5;UBERON:0004921,5.64e-07,118;UBERON:0001007,8.26e-07,145;UBERON:0001555,8.26e-07,145;UBERON:0007026,8.26e-07,145 | |||
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|short_description=p1@CLCA1 | |short_description=p1@CLCA1 | ||
}} | }} |
Latest revision as of 14:26, 19 September 2015
Short description: | p1@CLCA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLCA1_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000495894, ENST00000539889_5end |
EntrezGene: | CLCA1 |
HGNC: | 2015 |
UniProt: | F5H5S5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.92e-41 | 17 |
gastrointestinal system | 1.01e-35 | 25 |
large intestine | 9.09e-27 | 11 |
small intestine | 3.10e-22 | 4 |
colon | 2.22e-21 | 9 |
vermiform appendix | 4.23e-13 | 1 |
caecum | 4.23e-13 | 1 |
midgut | 4.23e-13 | 1 |
surface | 1.09e-12 | 1 |
lower digestive tract | 2.71e-10 | 5 |
subdivision of digestive tract | 5.64e-07 | 118 |
digestive system | 8.26e-07 | 145 |
digestive tract | 8.26e-07 | 145 |
primitive gut | 8.26e-07 | 145 |