FFCP PHASE1:Hg19::chrX:135614405..135614416,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51442 | |EntrezGene=51442 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20985 | |HGNC=20985 | ||
|TSSclassifier=strong | |||
|UniProt=Q99990,E9PHC2 | |UniProt=Q99990,E9PHC2 | ||
|association_with_transcript=94bp_to_ENST00000370634,ENST00000430688,NM_016267,uc004ezy.2_5end | |association_with_transcript=94bp_to_ENST00000370634,ENST00000430688,NM_016267,uc004ezy.2_5end | ||
|cluster_id=chrX:135614405..135614416,+ | |||
|coexpression_cluster_id=C83 | |||
|description=CAGE_peak_3_at_VGLL1_5end | |description=CAGE_peak_3_at_VGLL1_5end | ||
|id=chrX:135614405..135614416,+ | |id=chrX:135614405..135614416,+ | ||
|ontology_enrichment_celltype=CL:0000066!6.46e-19!254;CL:0002076!4.25e-17!43;CL:0000223!7.08e-14!59;CL:0002159!8.33e-10!13;CL:0000244!9.37e-10!4;CL:0000731!9.37e-10!4;CL:0002541!1.17e-08!3;CL:0000349!1.81e-08!3;CL:0002577!1.81e-08!3;CL:0000239!1.44e-07!3;CL:1000615!1.44e-07!3;CL:0002306!1.44e-07!3;CL:0002231!4.11e-07!3;CL:0002368!5.81e-07!13;CL:0002077!7.04e-07!33 | |ontology_enrichment_celltype=CL:0000066!6.46e-19!254;CL:0002076!4.25e-17!43;CL:0000223!7.08e-14!59;CL:0002159!8.33e-10!13;CL:0000244!9.37e-10!4;CL:0000731!9.37e-10!4;CL:0002541!1.17e-08!3;CL:0000349!1.81e-08!3;CL:0002577!1.81e-08!3;CL:0000239!1.44e-07!3;CL:1000615!1.44e-07!3;CL:0002306!1.44e-07!3;CL:0002231!4.11e-07!3;CL:0002368!5.81e-07!13;CL:0002077!7.04e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0000349;9.45e-22;19!CL:0002541;1.85e-14;3!CL:0002577;3.77e-14;3!CL:0002536;5.92e-10;2!CL:0000244;9.76e-10;4!CL:0000731;9.76e-10;4!CL:0000575;1.62e-09;2!CL:1000415;2.60e-09;2!CL:0002681;1.67e-08;12!CL:0002584;1.67e-08;12!CL:0002251;5.15e-07;20!CL:1000507;9.50e-07;10!CL:1000494;9.50e-07;10!CL:1000449;9.50e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.00e-21,19;CL:0002541,1.77e-14,3;CL:0002577,3.94e-14,3;CL:0000066,7.32e-12,253;CL:0002536,5.93e-10,2;CL:0000244,7.49e-10,4;CL:0000731,7.49e-10,4;CL:0000575,1.55e-09,2;CL:1000415,3.36e-09,2;CL:0002681,1.39e-08,12;CL:0002584,1.39e-08,12;CL:0002251,4.83e-07,20;CL:1000507,7.98e-07,10;CL:1000494,7.98e-07,10;CL:1000449,8.24e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.45e-20!14;UBERON:0000158!2.45e-20!14;UBERON:0003124!8.24e-18!7;UBERON:0004119!2.87e-12!169;UBERON:0000925!2.87e-12!169;UBERON:0006595!2.87e-12!169;UBERON:0006554!4.01e-12!44;UBERON:0001008!9.45e-12!45;UBERON:0000365!1.29e-11!5;UBERON:0001987!7.51e-11!4;UBERON:0004340!7.51e-11!4;UBERON:0000478!1.12e-10!24;UBERON:0005910!1.32e-09!6;UBERON:0000476!1.17e-08!3;UBERON:0000920!1.17e-08!3;UBERON:0005911!1.81e-08!82;UBERON:0004923!3.59e-08!57;UBERON:0006853!1.44e-07!3;UBERON:0007685!1.44e-07!3;UBERON:0004134!1.44e-07!3;UBERON:0000077!5.02e-07!130;UBERON:0000464!7.16e-07!104 | |ontology_enrichment_uberon=UBERON:0005631!2.45e-20!14;UBERON:0000158!2.45e-20!14;UBERON:0003124!8.24e-18!7;UBERON:0004119!2.87e-12!169;UBERON:0000925!2.87e-12!169;UBERON:0006595!2.87e-12!169;UBERON:0006554!4.01e-12!44;UBERON:0001008!9.45e-12!45;UBERON:0000365!1.29e-11!5;UBERON:0001987!7.51e-11!4;UBERON:0004340!7.51e-11!4;UBERON:0000478!1.12e-10!24;UBERON:0005910!1.32e-09!6;UBERON:0000476!1.17e-08!3;UBERON:0000920!1.17e-08!3;UBERON:0005911!1.81e-08!82;UBERON:0004923!3.59e-08!57;UBERON:0006853!1.44e-07!3;UBERON:0007685!1.44e-07!3;UBERON:0004134!1.44e-07!3;UBERON:0000077!5.02e-07!130;UBERON:0000464!7.16e-07!104 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;3.33e-21;10!UBERON:0000158;3.33e-21;10!UBERON:0000478;1.68e-20;24!UBERON:0001987;1.70e-18;4!UBERON:0003124;1.85e-14;3!UBERON:0000920;1.85e-14;3!UBERON:0000305;2.46e-10;7!UBERON:0006554;1.41e-09;30!UBERON:0001008;1.41e-09;30!UBERON:0001225;1.67e-08;12!UBERON:0008987;1.67e-08;12!UBERON:0000365;6.99e-08;5!UBERON:0004211;9.50e-07;10!UBERON:0009773;9.50e-07;10!UBERON:0001231;9.50e-07;10!UBERON:0004810;9.50e-07;10!UBERON:0001851;9.50e-07;15!UBERON:0006555;9.50e-07;15!UBERON:0000353;9.50e-07;15!UBERON:0004819;9.50e-07;15!UBERON:0001285;9.50e-07;15!UBERON:0007684;9.50e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.94e-37,14;UBERON:0000158,8.94e-37,14;UBERON:0003124,3.57e-31,7;UBERON:0000478,1.78e-20,24;UBERON:0001987,1.82e-18,4;UBERON:0004340,1.82e-18,4;UBERON:0006554,1.59e-14,47;UBERON:0000920,1.77e-14,3;UBERON:0001008,3.69e-14,48;UBERON:0004923,2.94e-13,66;UBERON:0000305,2.62e-10,7;UBERON:0004871,5.02e-09,8;UBERON:0001225,1.39e-08,12;UBERON:0008987,1.39e-08,12;UBERON:0000365,5.68e-08,5;UBERON:0000995,3.54e-07,21;UBERON:0004810,7.98e-07,10;UBERON:0005795,8.05e-07,22;UBERON:0003975,8.05e-07,22;UBERON:0001851,8.24e-07,15;UBERON:0004211,8.24e-07,15;UBERON:0009773,8.24e-07,15;UBERON:0000353,8.24e-07,15;UBERON:0001231,8.24e-07,15;UBERON:0001285,8.24e-07,15;UBERON:0007684,8.24e-07,15;UBERON:0004208,8.24e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,4.18680700783456,9.17453762946723,3.4289707169699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,2.18577172975525,2.96627554227544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,0,0,0,0,0.116193942869518,0.518305275076852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8448265781467,0,0.658501712451753,0,1.00528972411631,1.48141512253647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.567100388969546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.15316871458641,6.65741758041988,8.16453791990137,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,1.00253235151642,0.184161977871793,0,0,0,1.80479845162965,1.46329140498388,0,0,0,0,0,0,0,0,0,1.52925763827023,2.49322802678617,0.223874754722178,0,0,0,0,0,6.80070676874967,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0.661139661443912,0,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,7.62564786291911,1.29151611801369,1.68471475667626,0.886860307073351,1.60806380144872,0,0,0,0,0,0,0,0,0,0,7.59624669541198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34242278632766,5.04839957415486,0,0,0,0,0,0,0,0,0,0,0,0,3.77447074818773,0,0,0.789147245095469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5979318729851,63.00986637566,26.50995874897,11.803042910081,6.96141709854154,15.991043280559,0,0,0,0,0,0,0,0,0,1.14262965711403,3.39247371441458,0,0,0,0,0,0,0,0,0,0,0,2.15231080825299,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.173559738335131,1.46988596121566,9.57651272384428,0,0,0,0,0,0,0,0.225980740780532,0,0,0,2.34661659281764,1.04206466326994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945668487590378,1.04909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8011154686501,0.106787412567695,0.943225830597996,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,1.10057159113007,0,0,0,0,0.0752103283492573,0,0,74.6434079272054,0,0.591424344868181,0,0,0,0,0,0.548257766857182,0,0,12.1374306257616,0,0,0,0,19.4258190656179,0,0,0,0,0,0,0.156986185701028,0,2.80272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.4985648450572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0.651226148887796,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,4.18680700783456,9.17453762946723,3.4289707169699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,2.18577172975525,2.96627554227544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,0,0,0,0,0.116193942869518,0.518305275076852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8448265781467,0,0.658501712451753,0,1.00528972411631,1.48141512253647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.567100388969546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.15316871458641,6.65741758041988,8.16453791990137,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,1.00253235151642,0.184161977871793,0,0,0,1.80479845162965,1.46329140498388,0,0,0,0,0,0,0,0,0,1.52925763827023,2.49322802678617,0.223874754722178,0,0,0,0,0,6.80070676874967,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0.661139661443912,0,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,7.62564786291911,1.29151611801369,1.68471475667626,0.886860307073351,1.60806380144872,0,0,0,0,0,0,0,0,0,0,7.59624669541198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34242278632766,5.04839957415486,0,0,0,0,0,0,0,0,0,0,0,0,3.77447074818773,0,0,0.789147245095469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5979318729851,63.00986637566,26.50995874897,11.803042910081,6.96141709854154,15.991043280559,0,0,0,0,0,0,0,0,0,1.14262965711403,3.39247371441458,0,0,0,0,0,0,0,0,0,0,0,2.15231080825299,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.173559738335131,1.46988596121566,9.57651272384428,0,0,0,0,0,0,0,0.225980740780532,0,0,0,2.34661659281764,1.04206466326994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945668487590378,1.04909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8011154686501,0.106787412567695,0.943225830597996,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,1.10057159113007,0,0,0,0,0.0752103283492573,0,0,74.6434079272054,0,0.591424344868181,0,0,0,0,0,0.548257766857182,0,0,12.1374306257616,0,0,0,0,19.4258190656179,0,0,0,0,0,0,0.156986185701028,0,2.80272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.4985648450572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0.651226148887796,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@VGLL1 | |short_description=p3@VGLL1 | ||
}} | }} |
Latest revision as of 14:48, 19 September 2015
Short description: | p3@VGLL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VGLL1_5end |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | 94bp_to_ENST00000370634, ENST00000430688, NM_016267, uc004ezy.2_5end |
EntrezGene: | VGLL1 |
HGNC: | 20985 |
UniProt: | Q99990E9PHC2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.00e-21 | 19 |
chorionic membrane mesenchymal stem cell | 1.77e-14 | 3 |
placental epithelial cell | 3.94e-14 | 3 |
epithelial cell | 7.32e-12 | 253 |
amniotic epithelial cell | 5.93e-10 | 2 |
transitional epithelial cell | 7.49e-10 | 4 |
urothelial cell | 7.49e-10 | 4 |
corneal epithelial cell | 1.55e-09 | 2 |
epithelial cell of gall bladder | 3.36e-09 | 2 |
kidney cortical cell | 1.39e-08 | 12 |
renal cortical epithelial cell | 1.39e-08 | 12 |
epithelial cell of alimentary canal | 4.83e-07 | 20 |
kidney tubule cell | 7.98e-07 | 10 |
nephron tubule epithelial cell | 7.98e-07 | 10 |
epithelial cell of nephron | 8.24e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 8.94e-37 | 14 |
membranous layer | 8.94e-37 | 14 |
chorion | 3.57e-31 | 7 |
extraembryonic structure | 1.78e-20 | 24 |
placenta | 1.82e-18 | 4 |
allantois | 1.82e-18 | 4 |
urinary system structure | 1.59e-14 | 47 |
egg chorion | 1.77e-14 | 3 |
renal system | 3.69e-14 | 48 |
organ component layer | 2.94e-13 | 66 |
amnion | 2.62e-10 | 7 |
somatic layer of lateral plate mesoderm | 5.02e-09 | 8 |
cortex of kidney | 1.39e-08 | 12 |
renal parenchyma | 1.39e-08 | 12 |
urothelium | 5.68e-08 | 5 |
uterus | 3.54e-07 | 21 |
nephron tubule epithelium | 7.98e-07 | 10 |
embryonic uterus | 8.05e-07 | 22 |
internal female genitalia | 8.05e-07 | 22 |
cortex | 8.24e-07 | 15 |
nephron epithelium | 8.24e-07 | 15 |
renal tubule | 8.24e-07 | 15 |
parenchyma | 8.24e-07 | 15 |
nephron tubule | 8.24e-07 | 15 |
nephron | 8.24e-07 | 15 |
uriniferous tubule | 8.24e-07 | 15 |
nephrogenic mesenchyme | 8.24e-07 | 15 |